|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
OCR27
(D)
,
OCR27-1
(D)
,
OCR27-6
(D)
,
OCR27-7
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
thrL
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
thrL
Search strains by all related name:
thrL b0001 ECK0001 JW4367
|
General information (Go to Linear View: )
|
|
Gene Name
|
thrL
|
|
Alternative name
|
b0001,ECK0001,JW4367
|
|
Location, Length
|
190 - 255
(
+
)
;
0.00
min
;
66
(bp) ,
21
(aa)
|
|
Product
|
thr operon leader peptide
|
|
Operon Name
|
thrLABC
|
|
Note
|
GO_process: GO:0009088 - threonine biosynthetic process
|
|
Function
|
leader; Amino acid biosynthesis: Threonine,1.5.1.8 metabolism; building block biosynthesis; amino acids; threonine
|
|
Gene Ontology
|
GO:0008652
;
amino acid biosynthetic process ( thrL )
GO:0009088
;
threonine biosynthetic process ( thrL )
GO:0031554
;
regulation of transcription termination ( thrL )
GO:0031556
;
ribosome-mediated transcriptional attenuation ( thrL )
|
|
PID
|
1786182
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
LPT_ECOLI
(
P03059
)
|
|
- Protein name
|
Thr operon leader peptide
|
|
- Synonyms
|
Thr operon attenuator
|
|
- Gene name
|
Name=thrL; OrderedLocusNames=b0001, c5491, SF0001, S0001;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
thrL
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
|
| Sequences |
Amino acid
FASTA format
|
0001 MKRISTTITT TITITTGNGA G
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CGTGAGTAAA TTAAAATTTT ATTGACTTAG
-070 GTCACTAAAT ACTTTAACCA ATATAGGCAT AGCGCACAGA CAGATAAAAA TTACAGAGTA CACAACATCC
0001 atgaaacgca ttagcaccac cattaccacc accatcacca ttaccacagg taacggtgcg ggctgaCGCG
0071 TACAGGAAAC ACAGAAAAAA GCCCGCACCT GACAGTGCGG GCTTTTTTTT TCGACCAAAG GTAACGAGGT
0141 AACAACCATG CGAGTGTTGA AGTTCG
|
