|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR35
(D)
,
OCR35-3
(D)
,
OCR35-5
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yaeR
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yaeR
Search strains by all related name:
yaeR b0187 ECK0186 JW0182 o138
|
General information (Go to Linear View: )
|
|
Gene Name
|
yaeR
|
|
Alternative name
|
b0187,ECK0186,JW0182,o138
|
|
Location, Length
|
211,877 - 212,266
(
+
)
;
4.57
min
;
390
(bp) ,
129
(aa)
|
|
Product
|
putative lyase
|
|
Operon Name
|
yaeR
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
87081697
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YAER_ECOLI
(
P52096
;
P75669
)
|
|
- Protein name
|
Hypothetical protein yaeR.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yaeR; OrderedLocusNames=b0187;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yaeR
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of The Fosfomycin Resistance Protein From Transposon Tn2921
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yaeR
|
|
PSI-BLAST
|
Probable lactoylglutathione lyase
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted lyase [Escherichia coli W3110]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
|
| Sequences |
Amino acid
FASTA format
|
0001 MLGLKQVHHI AIIATDYAVS KAFYCDILGF TLQSEVYREA RDSWKGDLAL NGQYVIELFS FPFPPERPSR
0071 PEACGLRHLA FSVDDIDAAV AHLESHNVKC ETIRVDPYTQ KRFTFFNDPD GLPLELYEQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AAGACGGCGT TTACCGCGTA CGAGTCCTAA
-070 AAATGGCGGG ATAACTTGCC AGAGCGGCTT CCGGGCGAGT AACGTGCTGT TAACAAATAA AGGAGACGTT
0001 atgctgggtt taaaacaggt tcaccatatt gcgattattg cgacggatta tgcggtgagc aaagctttct
0071 actgcgatat tcttggtttc acgctgcaaa gcgaagtcta tcgcgaagcg cgcgactcat ggaaagggga
0141 tttggcgctt aatgggcaat atgtgattga gcttttctca tttccgttcc cgccggaacg acccagccga
0211 ccggaagctt gcggtctgcg tcatctggct tttagcgttg atgacatcga tgcggcagtg gcgcaccttg
0281 aaagccataa cgtgaagtgt gaaaccatcc gtgtcgatcc atacacgcaa aaacgcttca ccttctttaa
0351 cgatccggac gggctgccgt tggaactgta tgagcagtaa GGCTTGTCAT CGCCGCATTT GCCCGGTAAC
0421 GTGCCGGGCA TTGCTACTGT AAAATCGCAC CATCATGACA CTCACGCTCA ATAGACAACT TCTCACCTCA
|
