|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
DE(lpcA-proB)70
,
OCR36,37-1
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
dinJ
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
dinJ
Search strains by all related name:
dinJ b0226 ECK0227 JW0216 sosA
|
General information (Go to Linear View: )
|
|
Gene Name
|
dinJ
|
|
Alternative name
|
b0226,ECK0227,JW0216,sosA
|
|
Location, Length
|
246,242 - 246,502
(
-
)
;
5.31
min
;
261
(bp) ,
86
(aa)
|
|
Product
|
antitoxin of YafQ-DinJ toxin-antitoxin system
|
|
Operon Name
|
dinJ-yafQ
|
|
Note
|
damage-inducible protein J; GO_process: GO:0006281 - DNA repair
|
|
Function
|
phenotype; Not classified
|
|
Gene Ontology
|
|
|
PID
|
1786420
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
DINJ_ECOLI
(
Q47150
)
|
|
- Protein name
|
DNA-damage-inducible protein J.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=dinJ; OrderedLocusNames=b0226;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
dinJ
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, The Crystal Structure Of The Nucleoside-Diphosphate-Sugar Epimerase From Agrobacterium Tumefaciens
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
DNA-damage-inducible protein J
|
|
PSI-BLAST
|
DNA-damage-inducible protein J
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted antitoxin of YafQ-DinJ toxin-antitoxin system [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MAANAFVRAR IDEDLKNQAA DVLAGMGLTI SDLVRITLTK VAREKALPFD LREPNQLTIQ SIKNSEAGID
0071 VHKAKDADDL FDKLGI
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tgtaaaaaca tccgtttatt aaattactca
-070 tggattgtcg ctgttgctca tttgagctac aattcaagct gaataaatat acagcacagg agatacccca
0001 atggctgcta acgcgtttgt tcgcgcccga atcgatgaag atctgaagaa tcaggcagcg gacgtactgg
0071 ccgggatggg gctgaccatc tctgacctgg ttcgcataac cctcacaaag gtcgcgcgtg aaaaggcatt
0141 gccgtttgat ttacgcgagc ctaatcaatt aaccattcaa tcaatcaaaa acagcgaagc tggcattgat
0211 gttcataagg ccaaagacgc cgatgattta tttgataaat taggaattta aatatgattc aaagggatat
0281 tgaatactcg ggacaatatt caaaggatgt aaaacttgca caaaagcgtc ataaggatat gaataaattg
0351 aaatatctta t
|
