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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
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|
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Deletion
|
1
(LD)
,
OCR20,24-1 (LD 1-1_CRS)
(D)
,
OCR20,24-2 (LD 1-1_P/O)
(D)
,
OCR24
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
opgB
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
opgB
Search strains by all related name:
opgB b4359 ECK4349 f750 JW5794 mdoB yjjO
|
General information (Go to Linear View: )
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Gene Name
|
opgB
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|
Alternative name
|
b4359,ECK4349,f750,JW5794,mdoB,yjjO
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|
Location, Length
|
4,595,173 - 4,597,464
(
-
)
;
99.04
min
;
2292
(bp) ,
763
(aa)
|
|
Product
|
phosphoglycerol transferases I and II
|
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Operon Name
|
mdoB
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Note
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GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0008654 - phospholipid biosynthetic process; GO_process: GO:0009250 - glucan biosynthetic process; GO_process: GO:0006970 - response to osmotic stress
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Function
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enzyme; Osmoregulated periplasmic glucan (OPG) biosynthesis biolsynthesis
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|
Gene Ontology
|
GO:0005886
;
plasma membrane ( mdoB )
GO:0008152
;
metabolic process ( mdoB )
GO:0008484
;
sulfuric ester hydrolase activity ( mdoB )
GO:0008960
;
phosphatidylglycerol-membrane-oligosaccharide glycerophosphotransferase activity ( mdoB )
GO:0009250
;
glucan biosynthetic process ( mdoB )
GO:0016020
;
membrane ( mdoB )
GO:0016021
;
integral to membrane ( mdoB )
GO:0016740
;
transferase activity ( mdoB )
|
|
PID
|
87082433
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EC number
(KEGG Pathway)
|
2.7.8.20
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SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
OPGB_ECOLI
(
P39401
)
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- Protein name
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Phosphoglycerol transferase I
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- Synonyms
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EC 2.7.8.20, Phosphatidylglycerol-- membrane-oligosaccharide glycerophosphotransferase
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- Gene name
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Name=mdoB; Synonyms=opgB; OrderedLocusNames=b4359;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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mdoB
(
homologous genes of other bacterias
)
|
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PDB
(database updated :
2007.02.20
)
|
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PSI-BLAST
|
Chain A, Crystal Structure Of Intact Ahpf
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SWISS-PROT
(database updated :
2007.02.20
)
|
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BLAST
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Phosphoglycerol transferase I
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PSI-BLAST
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Phosphoglycerol transferase I
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nr
(database updated :
2007.02.20
)
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BLAST
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phosphoglycerol transferase I [Escherichia coli W3110]
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
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PROSITE
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PROSITE
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ASN_GLYCOSYLATION
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
RGD
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MMBR References
|
J Biol Chem. 1985;260:4799-4806
Characterization of an Escherichia coli mdoB mutant strain unable to transfer sn-1-phosphoglycerol to membrane-derived oligosaccharides.
Fiedler, W., and H. Rotering.
|
J Bacteriol. 1984;160(3):976-81.
Biosynthesis of membrane-derived oligosaccharides: characterization of mdoB mutants defective in phosphoglycerol transferase I activity.
Jackson BJ, Bohin JP, Kennedy EP.
(
6094515
)
|
Nucleic Acids Res. 1995;23:2105-2119
Analysis of the Escherichia coli genome. VI. DNA sequence of the region from 92.8 through 100 minutes.
Burland, V. D., G. Plunkett, H. J. Sofia, D. L. Daniels, and F. R. Blattner.
|
| Sequences |
Amino acid
FASTA format
|
0001 MSELLSFALF LASVLIYAWK AGRNTWWFAA TLTVLGLFVV LNITLFASDY FTGDGINDAV LYTLTNSLTG
0071 AGVSKYILPG IGIVLGLTAV FGALGWILRR RRHHPHHFGY SLLALLLALG SVDASPAFRQ ITELVKSQSR
0141 DGDPDFAAYY KEPSKTIPDP KLNLVYIYGE SLERTYFDNE AFPDLTPELG ALKNEGLDFS HTQQLPGTDY
0211 TIAGMVASQC GIPLFAPFEG NASASVSSFF PQNICLGDIL KNSGYQNYFV QGANLRFAGK DVFLKSHGFD
0281 HLYGSEELKS VVADPHYRND WGFYDDTVLD EAWKKFEELS RSGQRFSLFT LTVDTHHPDG FISRTCNRKK
0351 YDFDGKPNQS FSAVSCSQEN IATFINKIKA SPWFKDTVIV VSSDHLAMNN TAWKYLNKQD RNNLFFVIRG
0421 DKPQQETLAV KRNTMDNGAT VLDILGGDNY LGLGRSSLSG QSMSEIFLNI KEKTLAWKPD IIRLWKFPKE
0491 MKEFTIDQQK NMIAFSGSHF RLPLLLRVSD KRVEPLPESE YSAPLRFQLA DFAPRDNFVW VDRCYKMAQL
0561 WAPELALSTD WCVSQGQLGG QQIVQHVDKT TWQGKTAFKD TVIDMARYKG NVDTLKIVDN DIRYKADSFI
0631 FNVAGAPEEV KQFSGISRPE SWGRWSNAQL GDEVKIEYKH PLPKKFDLVI TAKAYGNNAS RPIPVRVGNE
0701 EQTLVLGNEV TTTTLHFDNP TDADTLVIVP PEPVSTNEGN ILGHSPRKLG IGMVEIKVVE REG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tttgacacta gaattgcagc aatatggcga
-070 cgccattaca ttgtgcttct caaaaagctt aaacgttggc taaacggccc ggtttagtga ggatcgcccg
0001 ttgtcagaac tactctcttt cgcccttttt ctcgcctctg tgctgattta cgcatggaaa gcgggacgta
0071 acacctggtg gtttgcagcc acgttaacgg tgctggggct atttgtcgtt ttaaatatca ccctgtttgc
0141 cagcgactat tttactggcg atggtattaa cgacgcggtt ctctatacct taaccaacag cctgaccggt
0211 gctggcgtca gcaaatacat tttgccgggt atcggcattg tgctggggct gacagcggtg ttcggtgcgc
0281 tgggctggat cctgcgccgt cgtcgccatc atccgcacca ttttggttac agcctgctgg cgctcttact
0351 ggcgctgggt tcggtggacg ccagcccggc atttcgtcag ataacggaac tggtgaaatc ccagtcacgc
0421 gacggcgacc cggactttgc ggcttattat aaagagccgt cgaaaactat ccctgacccg aaactcaacc
0491 tggtttatat ctacggcgaa agtctcgagc ggacctattt tgataacgag gctttcccgg atctcacgcc
0561 tgaactgggc gcgttgaaaa atgaaggcct ggatttcagc cacacgcagc agctgccggg aacagattac
0631 acgattgcgg gcatggtggc ttctcagtgc ggcataccgc tgtttgcccc ctttgaaggc aacgcctccg
0701 cctctgtctc cagcttcttc ccgcagaaca tctgtctggg agatatcctg aaaaactcgg gttatcagaa
0771 ctatttcgtg cagggcgcga atctgcgttt tgccggtaaa gatgtgttcc tgaagtcgca tggcttcgac
0841 cacttatacg gctcagaaga gctgaaaagc gtggtagccg acccgcacta tcgcaacgac tggggattct
0911 acgacgatac cgttctcgat gaagcgtgga aaaagtttga agagctttcc cgctcaggtc agcgattctc
0981 actgtttacc ctgacagtcg atacccatca cccggatggt tttatctctc gtacctgtaa ccgcaaaaaa
1051 tatgattttg acggtaaacc gaatcagtca ttcagcgcgg taagttgcag ccaggagaac atcgcgacgt
1121 ttatcaacaa aatcaaagcg tcaccgtggt ttaaagatac cgtcatcgtc gtctcttctg accatttagc
1191 gatgaacaac acggcgtgga aatacctcaa taagcaggat cgcaataacc tgttttttgt cattcgtggc
1261 gacaagccgc agcaagagac gctggcagtg aagcgtaaca cgatggataa cggcgcgacg gtgctggaca
1331 ttctcggtgg cgataactat ctcggacttg gtcgtagcag tttatccggg cagtcgatgt cggaaatctt
1401 cctcaatatc aaagagaaaa cattggcgtg gaagccagat atcatccgcc tgtggaaatt ccctaaagag
1471 atgaaagagt tcaccatcga ccagcagaaa aacatgattg ccttctcggg tagccatttc cgtttgccgc
1541 tgctgttgcg ggtttcagac aaacgcgtgg aaccgctgcc ggaaagcgaa tactcagcac cgctgcgttt
1611 ccagctggcc gatttcgctc cacgcgacaa tttcgtctgg gttgaccgtt gctacaagat ggcacaactc
1681 tgggctccgg aactggcact ttccaccgac tggtgtgtct cgcaagggca gcttggcggt cagcaaattg
1751 ttcagcatgt tgacaaaaca acatggcagg gcaaaacggc atttaaagat acggtcatcg acatggcgcg
1821 ttacaaaggc aatgtcgata cgctgaagat tgttgataac gatattcgct acaaagccga cagtttcatc
1891 tttaacgtcg ccggtgcgcc agaagaggtg aaacagttta gcgggatttc ccgtccggag tcgtggggcc
1961 gctggtccaa cgcgcagctg ggcgatgaag taaaaatcga gtacaagcat ccgctgccga agaaatttga
2031 cctggtgatt accgccaaag catacggcaa taacgccagc cgtcctattc cggtacgcgt aggcaatgaa
2101 gaacaaactc ttgtgctggg caatgaagtg accaccacca cactgcattt cgataaccca accgatgccg
2171 acacactggt aattgtgccg ccggaacctg tctcaaccaa cgaagggaat atcctcggac actcgccgcg
2241 taagctcggg atcggcatgg tggaaattaa agtggtagaa cgtgaagggt aattcctgac tgatgtgtag
2311 gtcgcatagg gtgcgaccta cacgccttct acggcttaca acacattatt aagaaacaaa aaaaacagcg
2381 cccaacactt cc
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