|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
relB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
relB
Search strains by all related name:
relB b1564 ECK1558 JW1556 RC
|
General information (Go to Linear View: )
|
|
Gene Name
|
relB
|
|
Alternative name
|
b1564,ECK1558,JW1556,RC
|
|
Location, Length
|
1,643,657 - 1,643,896
(
-
)
;
35.43
min
;
240
(bp) ,
79
(aa)
|
|
Product
|
Qin prophage; bifunctional antitoxin of theRelE-RelB toxin-antitoxin system/ transcriptional repressor
|
|
Operon Name
|
relBE-hokD
|
|
Note
|
negative regulator of translation; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription
|
|
Function
|
regulator; Global regulatory functions; Phage or Prophage Related
|
|
Gene Ontology
|
GO:0006350
;
transcription ( relB )
GO:0006355
;
regulation of transcription, DNA-dependent ( relB )
GO:0006950
;
response to stress ( relB )
|
|
PID
|
1787847
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
RELB_ECOLI
(
P07007
)
|
|
- Protein name
|
RelB protein.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=relB; OrderedLocusNames=b1564, SF1549, S1670;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
relB
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Antitoxin RelB
|
|
PSI-BLAST
|
Antitoxin RelB
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/ transcriptional repressor [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CK2_PHOSPHO_SITE
MYRISTYL
|
|
MMBR References
|
J Bacteriol. 1981;146(1):409-11.
Improved mapping of ksgB and integration of transposons near relB and terC in Escherichia coli.
Diderichsen B.
(
6260745
)
|
EMBO J. 1985;4:1059-1066
Sequence of the relB transcription unit from Escherichia coli and identification of the relB gene.
Bech, F. W., S. T. Jorgensen, and B. Diderichsen.
|
| Sequences |
Amino acid
FASTA format
|
0001 MGSINLRIDD ELKARSYAAL EKMGVTPSEA LRLMLEYIAD NERLPFKQTL LSDEDAELVE IVKERLRNPK
0071 PVRVTLDEL
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ccgttcttac gactactttc tgacttcctt
-070 cgtgacttgc cctaagcatg ttgtagtgcg atacttgtaa tgacatttgt aattacaaga ggtgtaagac
0001 atgggtagca ttaacctgcg tattgacgat gaacttaaag cgcgttctta cgccgcgctt gaaaaaatgg
0071 gtgtaactcc ttctgaagcg cttcgtctca tgctcgagta tatcgctgac aatgaacgct tgccgttcaa
0141 acagacactc ctgagtgatg aagatgctga acttgtggag atagtgaaag aacggcttcg taatcctaag
0211 ccagtacgtg tgacgctgga tgaactctga tggcgtattt tctggatttt gacgagcggg cactaaagga
0281 atggcgaaag ctgggctcga cggtacgtga acagttgaaa aagaagctgg ttgaagtact
|
