|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Gene. 1991;103(1):31-6.
Construction and characterization of an Escherichia coli mutant with a deletion of the metZ gene encoding tRNA (f1Met).
Kenri T, Kohno K, Goshima N, Imamoto F, Kano Y.
(
1715303
)
|
|
|
Deletion
|
DE(relA-argA)216
,
OCL44,45-15 (AK1-9 / BK2-9)
(D)
,
OCL44,45-8
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
metZ
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
metZ
Search strains by all related name:
metZ b2814 ECK2810 JWR0206 metZalpha
|
General information (Go to Linear View: )
|
|
tRNA Name
|
metZ
|
|
Alternative name
|
b2814,ECK2810,JWR0206,metZalpha
|
|
Location, Length
|
2,945,409 - 2,945,485
(
+
)
;
63.48
min
;
77
(bp) ,
|
|
Product
|
tRNA-Met
|
|
Operon Name
|
metZWV
|
|
Note
|
anticodon: CAU
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
|
MMBR References
|
Gene. 1994;138(1-2):261-2.
Three tandemly repeated structural genes encoding tRNA(f1Met) in the metZ operon of Escherichia coli K-12.
Kenri T, Imamoto F, Kano Y.
(
8125313
)
|
Gene. 1991;103(1):31-6.
Construction and characterization of an Escherichia coli mutant with a deletion of the metZ gene encoding tRNA (f1Met).
Kenri T, Kohno K, Goshima N, Imamoto F, Kano Y.
(
1715303
)
|
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H.
(
2184240
)
|
Gene. 1988;67(1):49-57.
Differential transcriptional control of the two tRNA(fMet) genes of Escherichia coli K-12.
Nagase T, Ishii S, Imamoto F.
(
2843439
)
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TTTAGTGATT TGTTTTTGTT CAAAATCATG
-070 CCAAATCCGT GATCGGGGTA AAAAAAAGGT TGCATGAAAA CGCGAGCGGA GTATAGTGCG CATCCACGGA
0001 cgcggggtgg agcagcctgg tagctcgtcg ggctcataac ccgaaggtcg tcggttcaaa tccggccccc
0071 gcaaccaATT AAAATTTGAT GAAGTAAAGC AGTACGGTGA CGCGGGGTGG AGCAGCCTGG TAGCTCGTCG
0141 GGCTCATAAC CCGAAGGTCG TCGGTTCAAA TCCGGCC
|
