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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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|
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Deletion
|
OCR36
(D)
|
|
Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
yafT
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
yafT
Search strains by all related name:
yafT b0217 ECK0217 JW0206 o261 o262a
|
General information (Go to Linear View: )
|
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Gene Name
|
yafT
|
|
Alternative name
|
b0217,ECK0217,JW0206,o261,o262a
|
|
Location, Length
|
237,335 - 238,120
(
+
)
;
5.12
min
;
786
(bp) ,
261
(aa)
|
|
Product
|
lipoprotein
|
|
Operon Name
|
yafT
|
|
Note
|
putative aminopeptidase
|
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Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( yafT )
GO:0016020
;
membrane ( yafT )
|
|
PID
|
1786410
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YAFT_ECOLI
(
P77339
)
|
|
- Protein name
|
Hypothetical lipoprotein yafT precursor.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yafT; OrderedLocusNames=b0217;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yafT
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical lipoprotein yafT precursor
|
|
PSI-BLAST
|
Hypothetical lipoprotein yafT precursor
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted aminopeptidase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
PROKAR_LIPOPROTEIN
|
| Sequences |
Amino acid
FASTA format
|
0001 MNSKKLCCIC VLFSLLAGCA SESSIDEKKK KAQVTQSNIN KNTPQQLTDK DLFGNETTLA VSEEDIQAAL
0071 DGDEFRVPLN SPVILVQSGN RAPETIMQEE MRKYYTVSTF SGIPDRQKPL TCNKNKDKNE NEDVASAENM
0141 NWMQALRFVA AKGHQKAIIV YQDMLQTGKY DSALKSTVWS DYKNDKLTDA ISLRYLVRFT LVDVATGEWA
0211 TWSPVNYEYK VLPPLPDKNE ASTTDMTEQQ IMQLKQKTYK AMVKDLVNRY Q
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ATTGATTTTG TTTGTTATTA TTTAAGTGAG
-070 GTATATAATT AGAGTCCGTT ATCAATGCTA AATATTCTAA TCATTATGAC AGGCGAGGGA GTGTCCAATT
0001 atgaattcaa aaaagctttg ttgcatatgt gtgttattct cgctgcttgc aggatgtgcc tctgaatctt
0071 ctattgatga aaagaagaaa aaagctcaag tcacacaaag taatattaat aaaaacactc cccagcaact
0141 gacagacaaa gatttattcg gtaatgaaac cactctggcc gtatccgaag aggatattca agctgcgctt
0211 gatggagatg agttccgcgt tccccttaat tctcctgtaa tacttgttca atccggcaac cgcgcaccgg
0281 aaaccattat gcaggaggag atgcgaaaat attatactgt ttccacattc tctggtatcc cggacaggca
0351 aaagcctctg acttgtaaca aaaacaaaga taaaaatgag aacgaggatg ttgccagtgc tgagaatatg
0421 aactggatgc aggcactgcg ttttgtggct gcaaaaggac atcagaaagc gattattgtt taccaggata
0491 tgttgcagac aggaaaatat gactctgcgc tgaaatcaac agtatggtcc gactataaaa atgacaaact
0561 cactgacgct atctccctgc gctacctggt acgtttcacg ctggtggatg tggcaacagg tgagtgggct
0631 acctggtcgc cggtgaatta tgaatataaa gtgcttccac cattgcccga caagaatgaa gccagtacga
0701 ctgatatgac agagcagcaa atcatgcaac ttaagcaaaa gacctataaa gcgatggtaa aagatttggt
0771 taaccgctat caataaTAAA TTATATCTGC CGCCAGGAAT TTCTGGCGGC AATAATACAA AATTCTTTGC
0841 ATAAGAAATT TTTCTTGACA AAGACAGTGC AAGAAAGGAC ATGGAA
|
