PEC Original Annotations
|
Essentiality
|
Class
|
non-essential
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
Deletion
|
1
(LD)
,
OCR20
(D)
,
OCR20,24-1 (LD 1-1_CRS)
(D)
,
OCR20,24-2 (LD 1-1_P/O)
(D)
|
Related gene (W3110 PEC)
|
Gene Search
|
Search MG1655 PEC by gene name:
leuX
|
Related strains
|
Strains Search
|
Search strains by gene name:
leuX
Search strains by all related name:
leuX b4270 ECK4263 JWR0115 Su-6 supP
|
General information (Go to Linear View:)
|
tRNA Name
|
leuX
|
Alternative name
|
b4270,ECK4263,JWR0115,Su-6,supP
|
Location, Length
|
4,494,428 - 4,494,512
(
+
)
;
96.87
min
;
85
(bp) ,
|
Product
|
tRNA-Leu
|
Operon Name
|
leuX
|
Note
|
anticodon: UAA
|
Function
|
|
Gene Ontology
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
Homology Analysis
|
BLAST
|
Bacteria
|
GTOP
|
|
PDB
(database updated :
2007.02.20
)
|
PSI-BLAST
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
BLAST
|
|
PSI-BLAST
|
|
nr
(database updated :
2007.02.20
)
|
BLAST
|
|
Pfam 28.0
(database updated :
2015-05
)
|
Pfam
|
|
PROSITE
|
PROSITE
|
|
MMBR References
|
Microbiol. Rev. 1988;52:354-374.
Transfer ribonucleic acid-mediated suppression of termination codons in Escherichia coli.
Eggertsson, G., and D. Soll.
|
J Bacteriol. 1980;141(2):977-8.
Mapping of the supP (Su6+) amber suppressor gene in Escherichia coli.
Arnardottir A, Thorbjarnardottir S, Eggertsson G.
(
6154043
)
|
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H.
(
2184240
)
|
J Mol Biol. 1987;197(4):659-70.
Expression of the leuX gene in Escherichia coli. Regulation at transcription and tRNA processing steps.
Nomura T, Fujita N, Ishihama A.
(
2448476
)
|
J Bacteriol. 1985;161(1):207-11.
Escherichia coli supH suppressor: temperature-sensitive missense suppression caused by an anticodon change in tRNASer2.
Thorbjarnardottir S, Uemura H, Dingermann T, Rafnar T, Thorsteinsdottir S, Soll D, Eggertsson G.
(
3155715
)
|
J Bacteriol. 1985;161(1):219-22.
Leucine tRNA family of Escherichia coli: nucleotide sequence of the supP(Am) suppressor gene.
Thorbjarnardottir S, Dingermann T, Rafnar T, Andresson OS, Soll D, Eggertsson G.
(
2981802
)
|
J Mol Biol. 1984;177(4):627-44.
Identification of transfer RNA suppressors in Escherichia coli. IV. Amber suppressor Su+6 a double mutant of a new species of leucine tRNA.
Yoshimura M, Inokuchi H, Ozeki H.
(
6207302
)
|
Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GCTGAAAATT TCAGCACTTA GCGAGGTGCG
-070 AGCAAGCTGG CGCTTGCATG GTGGCGTGCG ACAGGTATAA TCCACAACGT TTTCCGCATA CCTCTTCAGT
0001 gccgaagtgg cgaaatcggt agacgcagtt gattcaaaat caaccgtaga aatacgtgcc ggttcgagtc
0071 cggccttcgg caccaAAAGT ATGTAAATAG ACCTCAACTG AGGTCTTTTT TTATGCCTGA AATCCAGTGT
0141 TTATCTATCT TTCCCGCTAT ATTAACTCTC TCAAGGTCAA CCGAT
|