|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
DE(tonB-cysB)206
,
OCR68,69-1
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
trpL
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
trpL
Search strains by all related name:
trpL b1265 ECK1259 JW1257 trpEE
|
General information (Go to Linear View: )
|
|
Gene Name
|
trpL
|
|
Alternative name
|
b1265,ECK1259,JW1257,trpEE
|
|
Location, Length
|
1,321,062 - 1,321,106
(
-
)
;
28.47
min
;
45
(bp) ,
14
(aa)
|
|
Product
|
trp operon leader peptide
|
|
Operon Name
|
trpLEDCBA
|
|
Note
|
GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000162 - tryptophan biosynthetic process
|
|
Function
|
leader; Amino acid biosynthesis: Tryptophan
|
|
Gene Ontology
|
GO:0000162
;
tryptophan biosynthetic process ( trpL )
GO:0008652
;
amino acid biosynthetic process ( trpL )
GO:0009073
;
aromatic amino acid family biosynthetic process ( trpL )
|
|
PID
|
1787519
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
LPW_ECOLI
(
P03053
)
|
|
- Protein name
|
Trp operon leader peptide.
|
|
- Synonyms
|
|
|
- Gene name
|
OrderedLocusNames=b1265, c5494, z2545, ECs1837, SF1268, S4805;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
trpL
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Trp operon leader peptide
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
trp operon leader peptide [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MKAIFVLKGW WRTS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 catcataacg gttctggcaa atattctgaa
-070 atgagctgtt gacaattaat catcgaacta gttaactagt acgcaagttc acgtaaaaag ggtatcgaca
0001 atgaaagcaa ttttcgtact gaaaggttgg tggcgcactt cctgaaacgg gcagtgtatt caccatgcgt
0071 aaagcaatca gatacccagc ccgcctaatg agcgggcttt tttttgaaca aaattagaga ataacaatgc
0141 aaaca
|
