|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
14
(LD)
,
OCL70,72-3 (LD 14B_CRS)
(D)
,
OCL70,72-4 (LD 14C_P/O)
(D)
,
OCL72
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
insH1
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
insH1
Search strains by all related name:
insH1 b2192 ECK0261 insH
|
General information (Go to Linear View: )
|
|
Gene Name
|
insH1
|
|
Alternative name
|
b2192,ECK0261,insH
|
|
Location, Length
|
2,287,087 - 2,288,103
(
-
)
;
49.29
min
;
1017
(bp) ,
338
(aa)
|
|
Product
|
IS5 transposase and trans-activator
|
|
Operon Name
|
insH-8
|
|
Note
|
|
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Function
|
IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related
|
|
Gene Ontology
|
GO:0003677
;
DNA binding ( insH1 )
GO:0004803
;
transposase activity ( insH1 )
GO:0006310
;
DNA recombination ( insH1 )
GO:0006313
;
transposition, DNA-mediated ( insH1 )
|
|
PID
|
1788518
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
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|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
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PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MFVIWSHRTG FIMSHQLTFA DSEFSSKRRQ TRKEIFLSRM EQILPWQNMV EVIEPFYPKA GNGRRPYPLE
0071 TMLRIHCMQH WYNLSDGAME DALYEIASMR LFARLSLDSA LPDRTTIMNF RHLLEQHQLA RQLFKTINRW
0141 LAEAGVMMTQ GTLVDATIIE APSSTKNKEQ QRDPEMHQTK KGNQWHFGMK AHIGVDAKSG LTHSLVTTAA
0211 NEHDLNQLGN LLHGEEQFVS ADAGYQGAPQ REELAEVDVD WLIAERPGKV RTLKQHPRKN KTAINIEYMK
0281 ASIRARVEHP FRIIKRQFGF VKARYKGLLK NDNQLAMLFT LANLFRADQM IRQWERSH
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 aatgcatcaa tctggttctg tttctctttg
-070 tcgttccgca atatctgttc tggtggctac agcgttatgg aaggtgcgaa caagtccctg atatgagatc
0001 atgtttgtca tctggagcca tagaacaggg ttcatcatga gtcatcaact taccttcgcc gacagtgaat
0071 tcagcagtaa gcgccgtcag accagaaaag agattttctt gtcccgcatg gagcagattc tgccatggca
0141 aaacatggtg gaagtcatcg agccgtttta ccccaaggct ggtaatggcc ggcgacctta tccgctggaa
0211 accatgctac gcattcactg catgcagcat tggtacaacc tgagcgatgg cgcgatggaa gatgctctgt
0281 acgaaatcgc ctccatgcgt ctgtttgccc ggttatccct ggatagcgcc ttgccggacc gcaccaccat
0351 catgaatttc cgccacctgc tggagcagca tcaactggcc cgccaattgt tcaagaccat caatcgctgg
0421 ctggccgaag caggcgtcat gatgactcaa ggcaccttgg tcgatgccac catcattgag gcacccagct
0491 cgaccaagaa caaagagcag caacgcgatc cggagatgca tcagaccaag aaaggcaatc agtggcactt
0561 tggcatgaag gcccacattg gtgtcgatgc caagagtggc ctgacccaca gcctggtcac caccgcggcc
0631 aacgagcatg acctcaatca gctgggtaat ctgctgcatg gagaggagca atttgtctca gccgatgccg
0701 gctaccaagg ggcgccacag cgcgaggagc tggccgaggt ggatgtggac tggctgatcg ccgagcgccc
0771 cggcaaggta agaaccttga aacagcatcc acgcaagaac aaaacggcca tcaacatcga atacatgaaa
0841 gccagcatcc gggccagggt ggagcaccca tttcgcatca tcaagcgaca gttcggcttc gtgaaagcca
0911 gatacaaggg gttgctgaaa aacgataacc aactggcgat gttattcacg ctggccaacc tgtttcgggc
0981 ggaccaaatg atacgtcagt gggagagatc tcactaaaaa ctggggataa cgccttaaat ggcgaagaaa
1051 cggtctaaat aggctgattc aaggcattta cgggagaaaa aatcggctca aacatgaaga aatgaaa
|
