|
PEC Original Annotations
|
|
Essentiality
|
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Class
|
non-essential
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|
References (PMID)
|
|
|
Deletion
|
9-1
(LD)
,
OCR36,37-6 (LD 9C::Ap)
(D)
,
OCR37
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
mhpR
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|
Related strains
|
|
Strains Search
|
Search strains by gene name:
mhpR
Search strains by all related name:
mhpR b0346 ECK0343 f315 f315b JW0337
|
General information (Go to Linear View: )
|
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Gene Name
|
mhpR
|
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Alternative name
|
b0346,ECK0343,f315,f315b,JW0337
|
|
Location, Length
|
366,811 - 367,644
(
-
)
;
7.91
min
;
834
(bp) ,
277
(aa)
|
|
Product
|
DNA-binding transcriptional activator, 3HPP-binding
|
|
Operon Name
|
mhpR-lacI
|
|
Note
|
transcriptional regulator for mhp operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0019395 - fatty acid oxidation; GO_process: GO:0006350 - transcription
|
|
Function
|
regulator; Not classified
|
|
Gene Ontology
|
GO:0003677
;
DNA binding ( mhpR )
GO:0006350
;
transcription ( mhpR )
GO:0006355
;
regulation of transcription, DNA-dependent ( mhpR )
GO:0019439
;
aromatic compound catabolic process ( mhpR )
|
|
PID
|
145693096
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YIAJ_ECOLI
(
P37671
)
|
|
- Protein name
|
Putative HTH-type transcriptional regulator yiaJ.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yiaJ; OrderedLocusNames=b3574;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
mhpR
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, The Crystal Structure Of A Putative Transcriptional Regulator Rha06195 From Rhodococcus Sp. Rha1
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
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BLAST
|
Mhp operon transcriptional activator
|
|
PSI-BLAST
|
Mhp operon transcriptional activator
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
DNA-binding transcriptional activator, 3HPP-binding [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
|
|
MMBR References
|
In J. Blair (ed.), Chemistry and biology of pteridines. W. de Gruyter, New York, N.Y. 1983:585-589
Isolation and characterization of an E. coli mutant affected in dihydrofolate- and folylpolyglutamate-synthetase.
Ferone, R., S. C. Singer, M. H. Hanlon, and S. Roland.
|
J Bacteriol. 1997;179:2573-2581
Genetic characterization and expression in heterologous hosts of the 3-(3-hydroxyphenyl)propionate catabolic pathway of Escherichia coli K-12.
Ferrandez, A., J. L. Garcia, and E. Diaz.
|
Ph.D. thesis. University of Minnesota, Minneapolis-St. Paul. 1983
The degradation of 3-phenylpropionic acid by Escherichia coli.
Burlingame, R. P.
|
J Bacteriol. 1986;168(1):55-64.
Isolation and characterization of Escherichia coli mutants defective for phenylpropionate degradation.
Burlingame RP, Wyman L, Chapman PJ.
(
3531186
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MQNNEQTEYK TVRGLTRGLM LLNMLNKLDG GASVGLLAEL SGLHRTTVRR LLETLQEEGY VRRSPSDDSF
0071 RLTIKVRQLS EGFRDEQWIS ALAAPLLGDL LREVVWPTDV STLDVDAMVV RETTHRFSRL SFHRAMVGRR
0141 LPLLKTASGL TWLAFCPEQD RKELIEMLAS RPGDDYQLAR EPLKLEAILA RARKEGYGQN YRGWDQEEKI
0211 ASIAVPLRSE QRVIGCLNLV YMASAMTIEQ AAEKHLPALQ RVAKQIEEGV ESQAILVAGR RSGMHLR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tgcgctcagt ataggaaggg tgttttcggc
-070 tacaatcaaa acatgcccga atgtgcacca ggtgcaccac gttgttttaa ctatagaaat gtcaattaat
0001 atgcagaaca atgagcagac ggaatacaaa accgtgcgcg gcttaacccg cggtctaatg ttattaaata
0071 tgttaaataa acttgatggc ggtgccagcg tcgggctgct ggcggaactc agcggcctgc atcgcaccac
0141 tgtgcggcga ctgctggaga cgctgcagga agagggatat gtccgccgta gcccctccga tgatagtttt
0211 cgactgacca tcaaagtgcg gcaattaagc gaaggatttc gtgacgaaca gtggatttct gcactggcgg
0281 ccccactgct gggcgatctg ttgcgcgaag tggtatggcc gacagatgtg tccacgctgg atgttgatgc
0351 aatggtggta cgcgaaacca ctcaccgttt cagccgctta tcctttcacc gggcaatggt cgggcgacgt
0421 ttgccgcttc tgaaaaccgc ctcgggcctg acctggctgg ccttttgccc ggaacaagac cgcaaggaat
0491 taatcgaaat gttagcctcc cgccccggtg atgactatca actggcacgg gaaccgttaa agctggaagc
0561 cattctggcg cgcgcgcgca aagagggtta cggacagaac taccgcggct gggatcagga ggagaagatc
0631 gcctctatcg ccgtaccgct gcgcagtgaa caacgggtga ttggctgtct gaatctggtg tatatggcga
0701 gcgcaatgac cattgaacag gcagcggaaa agcatcttcc ggcgctacaa cgggtagcaa aacagatcga
0771 agaaggggtt gaatcgcagg ctattctggt ggccggaagg cgaagcggca tgcatttacg ttgacaccat
0841 cgaatggcgc aaaacctttc gcggtatggc atgatagcgc ccggaagaga gtcaattcag ggtggtgaat
0911 gtgaaaccag taacgttata cgat
|
