|
PEC Original Annotations
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Essentiality
|
|
Class
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non-essential
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References (PMID)
|
|
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Deletion
|
OCR35-4
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
tsaA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
tsaA
Search strains by all related name:
tsaA b0195 ECK0195 JW0191 yaeB
|
General information (Go to Linear View: )
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|
Gene Name
|
tsaA
|
|
Alternative name
|
b0195,ECK0195,JW0191,yaeB
|
|
Location, Length
|
218,887 - 219,594
(
-
)
;
4.72
min
;
708
(bp) ,
235
(aa)
|
|
Product
|
tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase, SAM-dependent
|
|
Operon Name
|
rcsF-yaeB
|
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Note
|
|
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Function
|
enzyme; tRNA modification
|
|
Gene Ontology
|
GO:0005515
;
protein binding ( yaeB )
|
|
PID
|
1786393
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YAEB_ECOLI
(
P28634
;
Q47676
)
|
|
- Protein name
|
Hypothetical UPF0066 protein yaeB.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yaeB; OrderedLocusNames=b0195;
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Homology Analysis
|
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BLAST
|
|
Bacteria
|
|
GTOP
|
yaeB
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, X-Ray Structure Of Yaeb From Haemophilus Influenzae. Northeast Structural Genomics Research Consortium (Nesgc) Target Ir47.
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
UPF0066 protein yaeB
|
|
PSI-BLAST
|
UPF0066 protein yaeB
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein b0195 [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
UPF0066
|
| Sequences |
Amino acid
FASTA format
|
0001 MSSFQFEQIG VIRSPYKEKF AVPRQPGLVK SANGELHLIA PYNQADAVRG LEAFSHLWIL FVFHQTMEGG
0071 WRPTVRPPRL GGNARMGVFA TRSTFRPNPI GMSLVELKEV VCHKDSVILK LGSLDLVDGT PVVDIKPYLP
0141 FAESLPDASA SYAQSAPAAE MAVSFTAEVE KQLLTLEKRY PQLTLFIREV LAQDPRPAYR KGEETGKTYA
0211 VWLHDFNVRW RVTDAGFEVF ALEPR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ccaatgctgt attactgcat agctgcgaag
-070 tcaccagcgg tacgccaggc tgctatcgtc aggctgtatg tatcggttct gcgcttaaca ttacggcgaa
0001 atgagcagtt tccagttcga gcaaataggc gttattcgct cgccctataa agaaaagttc gccgttccgc
0071 gccagccagg tctggtaaaa agcgccaacg gcgaactgca tctcattgct ccctacaacc aggccgacgc
0141 cgttcgcggc ctggaagcgt tcagccattt atggatcctt ttcgtctttc atcaaacgat ggaaggcggc
0211 tggcgtccga ctgtgcgtcc accgcgcctc ggcggtaacg ccagaatggg ggttttcgca acacgctcta
0281 ctttccgccc taacccaatt ggcatgtcgc tggtagagct gaaagaggtt gtttgccata aagacagcgt
0351 gattctgaag ctcggcagtc tggatctggt cgatggtacg ccggtagtgg atatcaaacc gtatctcccc
0421 tttgccgaat cgcttcccga tgccagtgcc agctatgcgc aaagtgcgcc agctgcagag atggcggtga
0491 gttttaccgc agaggtcgaa aagcagcttt tgacgctgga gaagcgttat ccgcagttaa cgctgtttat
0561 ccgcgaagta ctggcgcagg acccgcgccc ggcctatcgt aaaggtgagg aaacgggcaa aacctatgcc
0631 gtctggctac atgattttaa cgttcgctgg cgcgtcaccg acgcaggttt tgaagtcttt gcgctggaac
0701 cgcgttaaat tcacgccctt ctcttttgac atttcttttg cactggtaaa ctaaatcact tttttttgtc
0771 ccaggctcgc cttgagcctg ttctaccttc caactgga
|
