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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
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9-1
(LD)
,
DE(gpt-lac)5
,
DE(argF-lac)169
,
OCR36,37-6 (LD 9C::Ap)
(D)
|
|
Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
cynX
|
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Related strains
|
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Strains Search
|
Search strains by gene name:
cynX
Search strains by all related name:
cynX b0341 ECK0338 JW0332 o384
|
General information (Go to Linear View: )
|
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Gene Name
|
cynX
|
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Alternative name
|
b0341,ECK0338,JW0332,o384
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|
Location, Length
|
359,216 - 360,370
(
+
)
;
7.74
min
;
1155
(bp) ,
384
(aa)
|
|
Product
|
putative cyanate transporter
|
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Operon Name
|
cynTSX
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Note
|
cyanate transport; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009440 - cyanate catabolic process; GO_process: GO:0006805 - xenobiotic metabolic process
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Function
|
transport; Transport of small molecules: Anions
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Gene Ontology
|
GO:0005215
;
transporter activity ( cynX )
GO:0005886
;
plasma membrane ( cynX )
GO:0006810
;
transport ( cynX )
GO:0016020
;
membrane ( cynX )
GO:0016021
;
integral to membrane ( cynX )
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|
PID
|
1786536
|
EC number
(KEGG Pathway)
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|
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SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
CYNX_ECOLI
(
P17583
;
P71308; P75695
)
|
|
- Protein name
|
Cyanate transport protein cynX.
|
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- Synonyms
|
|
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- Gene name
|
Name=cynX; OrderedLocusNames=b0341;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
cynX
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
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BLAST
|
Cyanate transport protein cynX
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PSI-BLAST
|
High-affinity glucose transporter SNF3
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted cyanate transporter [Escherichia coli K12]
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
|
|
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PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
|
MMBR References
|
FEMS Microbiol Rev. 1990;7(3-4):247-52.
The cyanase operon and cyanate metabolism.
Anderson PM, Sung YC, Fuchs JA.
(
2094285
)
|
J Bacteriol. 1993;175:1443-1451
A physiological role for cyanate-induced carbonic anhydrase in Escherichia coli.
Guilloton, M. B., A. F. Lamblin, E. I. Kozliak, M. Gerami-Nejad, C. Tu, D. Silverman, P. M. Anderson, and J. A. Fuchs.
|
| Sequences |
Amino acid
FASTA format
|
0001 MLLVLVLIGL NMRPLLTSVG PLLPQLRQAS GMSFSVAALL TALPVVTMGG LALAGSWLHQ HVSERRSVAI
0071 SLLLIAVGAL MRELYPQSAL LLSSALLGGV GIGIIQAVMP SVIKRRFQQR TPLVMGLWSA ALMGGGGLGA
0141 AITPWLVQHS ETWYQTLAWW ALPAVVALFA WWWQSAREVA SSHKTTTTPV RVVFTPRAWT LGVYFGLING
0211 GYASLIAWLP AFYIEIGASA QYSGSLLALM TLGQAAGALL MPAMARHQDR RKLLMLALVL QLVGFCGFIW
0281 LPMQLPVLWA MVCGLGLGGA FPLCLLLALD HSVQPAIAGK LVAFMQGIGF IIAGLAPWFS GVLRSISGNY
0351 LMDWAFHALC VVGLMIITLR FAPVRFPQLW VKEA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ACCCGGAAGG TGGCGAACGT GCGGTCATCA
-070 CCTTAGATGG TAAATATCTG CCGACCAAAC CGTTCTGACA GCCATGCGCA ACCATCAAAA GACGTTCACG
0001 atgctgctgg tactggtgct gattggtctt aatatgcgac cactgctcac ctccgtcggg ccactgctac
0071 cgcaattgcg ccaggcgagc ggaatgagct ttagcgtggc tgccctgttg accgctctgc cggtggttac
0141 catgggcggg ctggcgctgg ccggaagctg gcttcatcag catgtcagcg aacgtcgcag tgtcgccatc
0211 agtctgttgc tgattgccgt cggtgcattg atgcgtgagc tttacccgca aagtgcgctg ctgcttagca
0281 gcgcactgct tggtggggtg gggatcggca tcattcaggc ggtgatgcct tcggtgatta aacggcggtt
0351 tcagcagcgc acgccactgg tgatggggct gtggtccgcg gctctgatgg gcggcggtgg gcttggtgcc
0421 gccataacgc cctggttagt tcaacatagc gaaacctggt atcaaacact cgcctggtgg gcgctgcctg
0491 ccgttgttgc gctctttgcc tggtggtggc aaagcgcccg cgaggtcgcc tcttcccaca agacaacaac
0561 cactccggtt cgcgtggtat tcactccccg cgcgtggacg ctgggtgttt acttcggtct gattaacggc
0631 ggttacgcca gcctgattgc ctggttaccc gctttctata ttgagattgg tgccagcgcg cagtacagcg
0701 gttccttact ggcattgatg acgcttgggc aagccgcagg agctttgctg atgcctgcta tggctcgcca
0771 tcaggatcgg cgcaaactgt taatgctggc gctggtgtta caactggtgg ggttctgcgg ctttatctgg
0841 ctgccgatgc aattgccggt attgtgggcg atggtgtgtg ggttaggtct gggcggcgcg tttccgctct
0911 gtttgctgct ggcgctcgat cactctgtgc aaccggctat tgctggcaag ctggtggcgt ttatgcaggg
0981 aatcggtttt atcatcgccg ggcttgcccc gtggttttct ggcgtgctgc gtagtatcag cggcaattac
1051 ctgatggact gggcatttca tgcgctgtgc gtcgttgggc tgatgatcat aaccctgcgt tttgcaccag
1121 tacgttttcc gcagctgtgg gtcaaagagg catgaTGCGA CGCTTGTTCC TGCGCTTTGT TCATGCCGGA
1191 TGCGGCTAAT GTAGATCGCT GAACTTGTAG GCCTGATAAG CGCAGCGTAT CAGGCAATTT TTATA
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