|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
safA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
safA
Search strains by all related name:
safA b1500 ECK4475 yneN
|
General information (Go to Linear View: )
|
|
Gene Name
|
safA
|
|
Alternative name
|
b1500,ECK4475,yneN
|
|
Location, Length
|
1,581,786 - 1,581,983
(
-
)
;
34.09
min
;
198
(bp) ,
65
(aa)
|
|
Product
|
two-component system connector membrane protein, EvgSA to PhoQP
|
|
Operon Name
|
safA-ydeO
|
|
Note
|
|
|
Function
|
regulator
|
|
Gene Ontology
|
|
|
PID
|
1787777
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MHATTVKNKI TQRDNYKEIM SAIVVVLLLT LTLIAIFSAI DQLSISEMGR IARDLTHFII NSLQG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tactgaagca ccagtcctat ttcctctttt
-070 ctccagcctg ttatattaag catactgatt aacgattttt aacgttatcc gctaaataaa catatttgaa
0001 atgcatgcga ccacagtgaa aaacaaaatc acgcaaagag acaactataa agaaatcatg tctgcaattg
0071 tggttgtctt attactgaca cttacgttga tagccatttt ttcggcaatt gatcagctga gtatttcaga
0141 aatgggtcgc attgcaagag atcttacaca tttcattatc aatagtttgc aaggctgaaa acaaacagca
0211 aattataaat atgaaatgtt aaaaaagtat cgataaaaac tttattgttt taaggagata aaatgtcgct
0281 cgtttgttct gttatatt
|
