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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
|
OCR36
(D)
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Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yafV
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Related strains
|
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Strains Search
|
Search strains by gene name:
yafV
Search strains by all related name:
yafV b0219 ECK0220 f256 JW5019 orf182
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General information (Go to Linear View: )
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Gene Name
|
yafV
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Alternative name
|
b0219,ECK0220,f256,JW5019,orf182
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Location, Length
|
239,419 - 240,189
(
-
)
;
5.16
min
;
771
(bp) ,
256
(aa)
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Product
|
putative C-N hydrolase family amidase, NAD(P)-binding
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Operon Name
|
yafV
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Note
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putative EC 3.5. amidase-type enzyme
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Function
|
putative enzyme; Not classified
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Gene Ontology
|
GO:0006807
;
nitrogen compound metabolic process ( yafV )
GO:0016787
;
hydrolase activity ( yafV )
GO:0016810
;
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds ( yafV )
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PID
|
1786412
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EC number
(KEGG Pathway)
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SWISS-PROT
(
Show details
[
2
more]
)
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Entry name(Acc.no)
|
YAFV_ECOLI
(
Q47679
;
Q9R2E1
)
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- Protein name
|
Hypothetical UPF0012 protein yafV.
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- Synonyms
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- Gene name
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Name=yafV; OrderedLocusNames=b0219;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
|
yafV
(
homologous genes of other bacterias
)
|
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PDB
(database updated :
2007.02.20
)
|
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PSI-BLAST
|
Chain A, Crystal Structure Of Saccharomyces Cerevisiae Nit3, A Member Of Branch 10 Of The Nitrilase Superfamily
|
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SWISS-PROT
(database updated :
2007.02.20
)
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BLAST
|
UPF0012 hydrolase yafV
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PSI-BLAST
|
UPF0012 hydrolase yafV
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nr
(database updated :
2007.02.20
)
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BLAST
|
predicted C-N hydrolase family amidase, NAD(P)-binding [Escherichia coli K12]
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
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PROSITE
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PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
RGD
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| Sequences |
Amino acid
FASTA format
|
0001 MPGLKITLLQ QPLVWMDGPA NLRHFDRQLE GITGRDVIVL PEMFTSGFAM EAAASSLAQD DVVNWMTAKA
0071 QQCNALIAGS VALQTESGSV NRFLLVEPGG TVHFYDKRHL FRMADEHLHY KAGNARVIVE WRGWRILPLV
0141 CYDLRFPVWS RNLNDYDLAL YVANWPAPRS LHWQALLTAR AIENQAYVAG CNRVGSDGNG CHYRGDSRVI
0211 NPQGEIIATA DAHQATRIDA ELSMAALREY REKFPAWQDA DEFRLW
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ttccaatatc agcatttgtt atcaatttat
-070 tctgcgctaa ggcaactgcc tgataaggtg ttaaagttat aaaacccttc gcataaagga gttgtacacc
0001 gtgcctggtt tgaagattac gcttttgcag caaccactgg tgtggatgga tggtcctgcc aacctgcgtc
0071 attttgatcg tcaactggaa ggtattaccg ggcgcgatgt gatcgttcta ccggagatgt ttaccagcgg
0141 ctttgccatg gaagcggcag cttcgtcgct agcacaagat gacgtagtga actggatgac agctaaggcg
0211 cagcagtgca atgcgctgat tgcaggcagt gttgcattac aaacggagtc tggttcggtt aaccgctttt
0281 tgctggttga gccgggcggc acggtacatt tttatgataa gcgtcatctg ttccgcatgg cagatgagca
0351 tctacattat aaagcgggca atgcgcgagt gattgtggaa tggcgcggct ggcgtatttt gccgctggtg
0421 tgctacgact tacgttttcc tgtgtggtcg cgcaatctca acgattatga cctcgccctg tacgtcgcca
0491 actggcctgc tccgcgctct ctgcactggc aggcattgct gacggcccgc gcgattgaga atcaggcgta
0561 tgtggcggga tgcaatcgcg tcggcagcga tggcaacggc tgccattatc gcggtgacag ccgggtgatt
0631 aatccgcaag gagagattat cgctactgcc gacgcgcatc aggcaacgcg cattgatgcg gagctgtcga
0701 tggcagcatt gcgggaatat agagaaaagt ttccggcatg gcaggatgcg gatgagttta ggttgtggtg
0771 agtgggggtt gtgtttaagg acggggagag tcggggtatt actacgaaag cccgctcccc gcaaggactg
0841 acgccaggta gtttctgtcc atggctgctt t
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