|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
DE(lpcA-proB)70
,
OCR36,37-1
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yafK
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yafK
Search strains by all related name:
yafK b0224 ECK0225 JW0214
|
General information (Go to Linear View: )
|
|
Gene Name
|
yafK
|
|
Alternative name
|
b0224,ECK0225,JW0214
|
|
Location, Length
|
245,065 - 245,805
(
-
)
;
5.28
min
;
741
(bp) ,
246
(aa)
|
|
Product
|
hypothetical protein
|
|
Operon Name
|
yafK
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
1786418
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YAFK_ECOLI
(
Q47148
)
|
|
- Protein name
|
Hypothetical protein yafK precursor.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yafK; OrderedLocusNames=b0224, z0282, ECs0251;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yafK
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yafK precursor
|
|
PSI-BLAST
|
Hypothetical protein yafK precursor
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein Z0282 [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MRKIALILAM LLIPCVSFAG LLGSSSSTTP VSKEYKQQLM GSPVYIQIFK EERTLDLYVK MGEQYQLLDS
0071 YKICKYSGGL GPKQRQGDFK SPEGFYSVQR NQLKPDSRYY KAINIGFPNA YDRAHGYEGK YLMIHGDCVS
0141 IGCYAMTNQG IDEIFQFVTG ALVFGQPSVQ VSIYPFRMTD ANMKRHKYSN FKDFWEQLKP GYDYFEQTRK
0211 PPTVSVVNGR YVVSKPLSHE VVQPQLASNY TLPEAK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ttttggtgat aatgtgagcc ttccaaatcc
-070 agactattcc gatttgggat ccattttgcc gtcctggcgt gtgtaaccgt tttatcaagg aataagcagt
0001 atgcgtaaaa tcgcattaat tcttgcgatg ttgttgatcc cgtgcgtttc atttgccggt ttgctgggca
0071 gcagtagctc taccacgcct gtgagcaaag agtataagca gcagttgatg ggatcccctg tctacatcca
0141 gatcttcaag gaagaacgta cgctcgatct ctacgtcaaa atgggcgagc aatatcaact gctcgacagc
0211 tataaaatct gtaaatattc cggcggctta gggccaaaac agcgtcaggg cgatttcaaa agcccggaag
0281 ggttttatag cgtccagcgt aatcagttaa aaccagacag ccgttactac aaagcgatta atattggttt
0351 ccccaatgcc tatgaccgtg cgcatggtta tgaagggaaa tacctgatga tccacggcga ttgtgtttcc
0421 atcggctgct acgcaatgac caatcagggt attgatgaga tattccagtt cgttactggt gcgctggtgt
0491 ttggtcagcc gagcgtgcaa gtgagtattt acccgttccg catgaccgac gccaatatga agcgccataa
0561 atattccaac tttaaggact tctgggagca actgaagccg ggttacgact actttgagca aacccgtaag
0631 ccaccaaccg tttctgtggt caatggtcgt tacgtggtca gcaagccgtt aagccacgaa gttgtgcagc
0701 cacaactggc atcaaactac acgctccccg aggcaaaata agcgccattc gcctggcata atcttttgcc
0771 aggtttcatt gcccgtcagc ggctgtgttg caatcaccgt gaccacatca ttcggtgtgg tctgcgagct
0841 g
|
