|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Microbiol Mol Biol Rev. 1998;62(3):814-984
Linkage map of Escherichia coli K-12, edition 10: the traditional map.
Berlyn MK.
(
9729611
)
|
|
|
Deletion
|
OCR47-14 (BK5-3 / AK4-3-27)
(D)
,
OCR47-15 (BK5-3 / AK4-3-29)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
glnU
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
glnU
Search strains by all related name:
glnU b0670 ECK0659 glnUalpha JWR0015 o39 o45 supB
|
General information (Go to Linear View: )
|
|
tRNA Name
|
glnU
|
|
Alternative name
|
b0670,ECK0659,glnUalpha,JWR0015,o39,o45,supB
|
|
Location, Length
|
696,088 - 696,162
(
-
)
;
15.00
min
;
75
(bp) ,
|
|
Product
|
tRNA-Gln
|
|
Operon Name
|
metT-leuW-glnUW-metU-glnVX
|
|
Note
|
anticodon: UUG
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
|
|
MMBR References
|
Microbiol. Rev. 1985;49:379-397.
Structure and organization of the transfer ribonucleic acid genes of Escherichia coli K-12.
Fournier, M. J., and H. Ozeki.
|
J Mol Biol. 1979;132(4):649-62.
Identification of transfer RNA suppressors in Escherichia coli. I. Amber suppressor su+2, an anticodon mutant of tRNA2Gln.
Inokuchi H, Yamao F, Sakano H, Ozeki H.
(
160949
)
|
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H.
(
2184240
)
|
Cell. 1981;23(1):239-49.
Organization and structure of an E. coli tRNA operon containing seven tRNA genes.
Nakajima N, Ozeki H, Shimura Y.
(
6163550
)
|
J Biol Chem. 1982;257:11113-11120
In vitro transcription of the supB-E tRNA operon of Escherichia coli.
Nakajima, N., H. Ozeki, and Y. Shimura.
|
Mol Gen Genet. 1987;209(3):618-20.
Organisation of the Escherichia coli chromosome between genes glnS and glnU, V.
Plumbridge J.
(
2828887
)
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ggcgaaattg gtagacgcac cagatttagg
-070 ttctggcgcc gcaaggtgtg cgagttcaag tctcgcctcc cgcaccattc accagaaagc gttgtacgga
0001 tggggtatcg ccaagcggta aggcaccggt ttttgatacc ggcattccct ggttcgaatc caggtacccc
0071 agccatcttc ttcgagtaag cggttcaccg cccggttatt ggggtatcgc caagcggtaa ggcaccggtt
0141 tttgataccg gcattccctg gttcgaatcc aggta
|
