|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
DE(pgl-grxA)502
,
OCR48,49-12
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
sdhD
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
sdhD
Search strains by all related name:
sdhD b0722 ECK0711 JW0712
|
General information (Go to Linear View: )
|
|
Gene Name
|
sdhD
|
|
Alternative name
|
b0722,ECK0711,JW0712
|
|
Location, Length
|
754,783 - 755,130
(
+
)
;
16.27
min
;
348
(bp) ,
115
(aa)
|
|
Product
|
succinate dehydrogenase, membrane subunit, binds cytochrome b556
|
|
Operon Name
|
sdhCDAB-sucABCD
|
|
Note
|
succinate dehydrogenase, hydrophobic subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0009060 - aerobic respiration
|
|
Function
|
enzyme; Energy metabolism, carbon: TCA cycle
|
|
Gene Ontology
|
GO:0005506
;
iron ion binding ( sdhD )
GO:0005886
;
plasma membrane ( sdhD )
GO:0006099
;
tricarboxylic acid cycle ( sdhD )
GO:0006118
;
electron transport ( sdhD )
GO:0006810
;
transport ( sdhD )
GO:0016020
;
membrane ( sdhD )
GO:0016021
;
integral to membrane ( sdhD )
GO:0046872
;
metal ion binding ( sdhD )
|
|
PID
|
1786941
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
DHSD_ECOLI
(
P10445
)
|
|
- Protein name
|
Succinate dehydrogenase hydrophobic membrane anchor protein.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=sdhD; OrderedLocusNames=b0722, c0800, SF0575, S0588;
|
|
MMBR References
|
Mol Microbiol. 1995;15(3):473-82.
Regulation of succinate dehydrogenase (sdhCDAB) operon expression in Escherichia coli in response to carbon supply and anaerobiosis: role of ArcA and Fnr.
Park SJ, Tseng CP, Gunsalus RP.
(
7783618
)
|
J Gen Microbiol. 1986;132(12):3239-51.
Transcript analysis of the citrate synthase and succinate dehydrogenase genes of Escherichia coli K12.
Wilde RJ, Guest JR.
(
3309132
)
|
Biochem J. 1984;222(2):519-34.
Nucleotide sequence encoding the flavoprotein and hydrophobic subunits of the succinate dehydrogenase of Escherichia coli.
Wood D, Darlison MG, Wilde RJ, Guest JR.
(
6383359
)
|
J Bacteriol. 1991;173(5):1569-70.
E. coli map. Physical map locations of genes encoding components of the aerobic respiratory chain of Escherichia coli.
Calhoun MW, Newton G, Gennis RB.
(
1847904
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MVSNASALGR NGVHDFILVR ATAIVLTLYI IYMVGFFATS GELTYEVWIG FFASAFTKVF TLLALFSILI
0071 HAWIGMWQVL TDYVKPLALR LMLQLVIVVA LVVYVIYGFV VVWGV
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ATTTTGGCTA TCTGGAAGAA ACATTCGAAG
-070 CGGGTAAACG CTCCGCCAAA ATCTCCTTTG TTATTACTGT CGTGCTTTCA CTTCTCGCAG GAGTCCTCGT
0001 atggtaagca acgcctccgc attaggacgc aatggcgtac atgatttcat cctcgttcgc gctaccgcta
0071 tcgtcctgac gctctacatc atttatatgg tcggtttttt cgctaccagt ggcgagctga catatgaagt
0141 ctggatcggt ttcttcgcct ctgcgttcac caaagtgttc accctgctgg cgctgttttc tatcttgatc
0211 catgcctgga tcggcatgtg gcaggtgttg accgactacg ttaaaccgct ggctttgcgc ctgatgctgc
0281 aactggtgat tgtcgttgca ctggtggttt acgtgattta tggattcgtt gtggtgtggg gtgtgtgaTG
0351 AAATTGCCAG TCAGAGAATT TGATGCAGTT GTGATTGGTG CCGGTGGCGC AGGTATGCGC GCGGCGCTGC
0421 AAATTTCCCA GAGCGGCCAG ACCTGTGC
|
