PEC Original Annotations
|
Essentiality
|
Class
|
non-essential
|
References (PMID)
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
Related gene (W3110 PEC)
|
Gene Search
|
Search MG1655 PEC by gene name:
ydeS
|
Related strains
|
Strains Search
|
Search strains by gene name:
ydeS
Search strains by all related name:
ydeS b1504 ECK1497 f176 f176a JW1498
|
General information (Go to Linear View:)
|
Gene Name
|
ydeS
|
Alternative name
|
b1504,ECK1497,f176,f176a,JW1498
|
Location, Length
|
1,586,333 - 1,586,863
(
-
)
;
34.19
min
;
531
(bp) ,
176
(aa)
|
Product
|
putative fimbrial-like adhesin protein
|
Operon Name
|
ydeTSR
|
Note
|
putative fimbrial-like protein; GO_component: GO:0009289 - pilus
|
Function
|
putative structure; Not classified
|
Gene Ontology
|
GO:0007155
;
cell adhesion ( ydeS )
GO:0009289
;
fimbrium ( ydeS )
GO:0042995
;
cell projection ( ydeS )
|
PID
|
1787781
|
EC number
(KEGG Pathway)
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YDES_ECOLI
(
P77789
)
|
- Protein name
|
Hypothetical fimbrial-like protein ydeS precursor.
|
- Synonyms
|
|
- Gene name
|
Name=ydeS; OrderedLocusNames=b1504;
|
Sequences |
Amino acid
FASTA format
|
0001 MKYNNIIFLG LCLGLTTYSA LSADSVIKIS GRVLDYGCTV SSDSLNFTVD LQKNSARQFP TTGSTSPAVP
0071 FQITLSECSK GTTGVRVAFN GIEDAENNTL LKLDEGSNTA SGLGIEILDA NMRPVKLNDL HAGMQWIPLV
0141 PEQNNILPYS ARLKSTQKSV NPGLVRASAT FTLEFQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 aaaaactcaa actgtattgt cgagtacaag
-070 cttcctgaag tttctcctgg taccttactg aaccagcaga cagcaatctg tcgctaagga acaatagatt
0001 atgaaataca ataacattat tttcctcggt ttatgtctgg ggttaaccac ctattctgct ttatccgcag
0071 atagcgttat taaaattagc gggcgcgtcc tcgattatgg ctgcacagtc tcatcggatt cgcttaattt
0141 taccgtagat ctccaaaaaa acagtgccag acaatttcca acgaccggta gcacaagtcc agccgtccct
0211 tttcagatta cgttaagtga atgcagcaaa gggacaacgg gggttcgggt tgcatttaac ggtattgagg
0281 atgcagaaaa taatactttg ttgaaactgg atgaaggaag caatacggcc tccggtttgg gtatagaaat
0351 attggacgca aatatgcgtc cggtgaaact gaatgatctt catgccggga tgcagtggat cccactggta
0421 ccagaacaga acaatatttt gccttactcc gctcgtctga agtcaactca gaagtccgtc aatccgggac
0491 tggtgagggc ttcggcaacc tttacccttg aatttcaata atcagagtca gatatgaaaa gacttcacaa
0561 gaggttcctg ttagctacgt tttgcgcgtt attcacagca actctccagg ccgccgatgt cactatcact
0631 g
|