|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
OCR40
(D)
,
OCR40-1
(D)
,
OCR40-4
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yajL
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yajL
Search strains by all related name:
yajL b0424 ECK0418 f198 JW5057 thiJ
|
General information (Go to Linear View: )
|
|
Gene Name
|
yajL
|
|
Alternative name
|
b0424,ECK0418,f198,JW5057,thiJ
|
|
Location, Length
|
442,275 - 442,865
(
-
)
;
9.53
min
;
591
(bp) ,
196
(aa)
|
|
Product
|
oxidative-stress-resistance chaperone
|
|
Operon Name
|
panE-yajL
|
|
Note
|
GO_process: GO:0009102 - biotin biosynthetic process
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
87081736
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
THIJ_ECOLI
(
Q46948
)
|
|
- Protein name
|
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=thiJ; OrderedLocusNames=b0424;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yajL
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of E. Coli Protein Yajl (Thij)
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Protein thiJ
|
|
PSI-BLAST
|
GMP synthase [glutamine-hydrolyzing]
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
Chain A, Crystal Structure Of E. Coli Protein Yajl (Thij)
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
|
MMBR References
|
Microbiology 1996;142:2969-2974
The thiJ locus and its relation to phosphorylation of hydroxymethylpyrimidine in Escherichia coli.
Mizote, T., M. Tsuda, T. Nakazawa, and H. Nakayama.
|
Vitamins 1995;64:619-632
Genetic analysis of thiamin pyrophosphate biosynthesis in Escherichia coli.
Nakayama, H.
|
| Sequences |
Amino acid
FASTA format
|
0001 MSASALVCLA PGSEETEAVT TIDLLVRGGI KVTTASVASD GNLAITCSRG VKLLADAPLV EVADGEYDVI
0071 VLPGGIKGAE CFRDSTLLVE TVKQFHRSGR IVAAICAAPA TVLVPHDIFP IGNMTGFPTL KDKIPAEQWL
0141 DKRVVWDARV KLLTSQGPGT AIDFGLKIID LLVGREKAHE VASQLVMAAG IYNYYE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tatatcaatg gttttctctt acgccgcgcc
-070 cgcgcgcatg ggattgccgt accggaaaac acccgcctgt ttgaaatggt aaaaagaaag gagagtgaat
0001 atgagcgcat cggcactggt ttgcctcgcc cctggtagtg aagagactga agccgtcacc actatcgatc
0071 tgctggttcg cggcggtatc aaagtcacca ctgccagcgt cgccagcgat ggtaacctgg cgattacctg
0141 ctcgcgcggc gtgaagctgc tggcggatgc gccgctggtc gaagtggctg atggcgaata tgacgtgatc
0211 gtgctgcctg gtggcattaa aggcgcggag tgttttcgcg atagcactct gctggttgaa accgttaaac
0281 agttccaccg ttccgggcgt atcgtcgcgg ctatttgcgc cgcgccagcc accgtgctgg tgccgcacga
0351 tatcttcccg attggtaata tgaccggctt cccgacgctg aaagacaaaa ttcccgccga acaatggctg
0421 gacaagcgcg tcgtctggga tgcacgggta aaattgctga ccagccaggg gccgggtaca gctatcgact
0491 ttggtctgaa aattatcgac ctgttggttg ggcgtgaaaa agcccatgaa gtggcatcac aactggtgat
0561 ggcggcaggg atttataatt attacgagta gtgtcggatg cggcaaacgt cgcatctgac cagatgcgac
0631 gtaaaaacca caaattacgg gcgatatacc ttcacattgt taaagccctg ctcgcgcaga t
|
