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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
|
Microbiol Mol Biol Rev. 1998;62(3):814-984
Linkage map of Escherichia coli K-12, edition 10: the traditional map.
Berlyn MK.
(
9729611
)
|
|
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Deletion
|
LD3-5-1
(LD)
,
OCL78
(D)
|
|
Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
fliC
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|
Related strains
|
|
Strains Search
|
Search strains by gene name:
fliC
Search strains by all related name:
fliC b1923 ECK1922 flaF H hag JW1908
|
General information (Go to Linear View: )
|
|
Gene Name
|
fliC
|
|
Alternative name
|
b1923,ECK1922,flaF,H,hag,JW1908
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|
Location, Length
|
2,000,134 - 2,001,630
(
-
)
;
43.11
min
;
1497
(bp) ,
498
(aa)
|
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Product
|
flagellar filament structural protein (flagellin)
|
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Operon Name
|
fliC
|
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Note
|
flagellar biosynthesis; flagellin, filament structural protein; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis
|
|
Function
|
structural component; Surface structures
|
|
Gene Ontology
|
GO:0001539
;
ciliary or flagellar motility ( fliC )
GO:0005198
;
structural molecule activity ( fliC )
GO:0009288
;
flagellin-based flagellum ( fliC )
GO:0009420
;
flagellin-based flagellum filament ( fliC )
|
|
PID
|
1788232
|
EC number
(KEGG Pathway)
|
|
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Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
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EcoGene
|
fliC
(
EG10321
)
|
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Number of removed
|
1 aa cleaved
|
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SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
FLIC_ECOLI
(
P04949
)
|
|
- Protein name
|
Flagellin.
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- Synonyms
|
|
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- Gene name
|
Name=fliC; Synonyms=flaF, hag; OrderedLocusNames=b1923;
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Homology Analysis
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BLAST
|
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Bacteria
|
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GTOP
|
fliC
(
homologous genes of other bacterias
)
|
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PDB
(database updated :
2007.02.20
)
|
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PSI-BLAST
|
Chain A, R-Type Straight Flagellar Filament Made Of Full-Length Flagellin
|
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SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Flagellin
|
|
PSI-BLAST
|
Flagellin B
|
|
nr
(database updated :
2007.02.20
)
|
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BLAST
|
flagellin [Escherichia coli K12]
|
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
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PROSITE
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PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
LEUCINE_ZIPPER
|
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MMBR References
|
Mol Gen Genet. 1989;216(1):44-50.
Isolation and characterization of Escherichia coli hag operator mutants whose hag48 expression has become repressible by a Salmonella H1 repressor.
Hanafusa T, Sakai A, Tominaga A, Enomoto M.
(
2659972
)
|
J Bacteriol. 1986;168(3):1479-83.
Nucleotide sequence of the hag gene encoding flagellin of Escherichia coli.
Kuwajima G, Asaka J, Fujiwara T, Fujiwara T, Node K, Kondo E.
(
3536885
)
|
J Bacteriol. 1983;155(1):74-81.
DNA sequence adjacent to flagellar genes and evolution of flagellar-phase variation.
Szekely E, Simon M.
(
6305924
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MAQVINTNSL SLITQNNINK NQSALSSSIE RLSSGLRINS AKDDAAGQAI ANRFTSNIKG LTQAARNAND
0071 GISVAQTTEG ALSEINNNLQ RVRELTVQAT TGTNSESDLS SIQDEIKSRL DEIDRVSGQT QFNGVNVLAK
0141 NGSMKIQVGA NDNQTITIDL KQIDAKTLGL DGFSVKNNDT VTTSAPVTAF GATTTNNIKL TGITLSTEAA
0211 TDTGGTNPAS IEGVYTDNGN DYYAKITGGD NDGKYYAVTV ANDGTVTMAT GATANATVTD ANTTKATTIT
0281 SGGTPVQIDN TAGSATANLG AVSLVKLQDS KGNDTDTYAL KDTNGNLYAA DVNETTGAVS VKTITYTDSS
0351 GAASSPTAVK LGGDDGKTEV VDIDGKTYDS ADLNGGNLQT GLTAGGEALT AVANGKTTDP LKALDDAIAS
0421 VDKFRSSLGA VQNRLDSAVT NLNNTTTNLS EAQSRIQDAD YATEVSNMSK AQIIQQAGNS VLAKANQVPQ
0491 QVLSLLQG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 aggttgtttt acgacagacg ataacagggt
-070 tgacggcgat tgagccgacg ggtggaaacc caatacgtaa tcaacgactt gcaatatagg ataacgaatc
0001 atggcacaag tcattaatac caacagcctc tcgctgatca ctcaaaataa tatcaacaag aaccagtctg
0071 cgctgtcgag ttctatcgag cgtctgtctt ctggcttgcg tattaacagc gcgaaggatg acgcagcggg
0141 tcaggcgatt gctaaccgtt tcacctctaa cattaaaggc ctgactcagg cggcccgtaa cgccaacgac
0211 ggtatctccg ttgcgcagac caccgaaggc gcgctgtccg aaatcaacaa caacttacag cgtgtgcgtg
0281 aactgacggt acaggccact accggtacta actctgagtc tgatctgtct tctatccagg acgaaattaa
0351 atcccgtctg gatgaaattg accgcgtatc tggtcagacc cagttcaacg gcgtgaacgt gctggcaaaa
0421 aatggctcca tgaaaatcca ggttggcgca aatgataacc agactatcac tatcgatctg aagcagattg
0491 atgctaaaac tcttggcctt gatggtttta gcgttaaaaa taacgataca gttaccacta gtgctccagt
0561 aactgctttt ggtgctacca ccacaaacaa tattaaactt actggaatta ccctttctac ggaagcagcc
0631 actgatactg gcggaactaa cccagcttca attgagggtg tttatactga taatggtaat gattactatg
0701 cgaaaatcac cggtggtgat aacgatggga agtattacgc agtaacagtt gctaatgatg gtacagtgac
0771 aatggcgact ggagcaacgg caaatgcaac tgtaactgat gcaaatacta ctaaagctac aactatcact
0841 tcaggcggta cacctgttca gattgataat actgcaggtt ccgcaactgc caaccttggt gctgttagct
0911 tagtaaaact gcaggattcc aagggtaatg ataccgatac atatgcgctt aaagatacaa atggcaatct
0981 ttacgctgcg gatgtgaatg aaactactgg tgctgtttct gttaaaacta ttacctatac tgactcttcc
1051 ggtgccgcca gttctccaac cgcggtcaaa ctgggcggag atgatggcaa aacagaagtg gtcgatattg
1121 atggtaaaac atacgattct gccgatttaa atggcggtaa tctgcaaaca ggtttgactg ctggtggtga
1191 ggctctgact gctgttgcaa atggtaaaac cacggatccg ctgaaagcgc tggacgatgc tatcgcatct
1261 gtagacaaat tccgttcttc cctcggtgcg gtgcaaaacc gtctggattc cgcggttacc aacctgaaca
1331 acaccactac caacctgtct gaagcgcagt cccgtattca ggacgccgac tatgcgaccg aagtgtccaa
1401 tatgtcgaaa gcgcagatca tccagcaggc cggtaactcc gtgttggcaa aagctaacca ggtaccgcag
1471 caggttctgt ctctgctgca gggttaatcg ttgtaacctg attaactgag actgacggca acgccaaatt
1541 gcctgatgcg ctgcgcttat caggcctaca agttgaattg caatttattg aatttgc
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