|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR62-1
(D)
,
OCR62-6
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ycfL
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ycfL
Search strains by all related name:
ycfL b1104 ECK1090 JW1090 o125 o125b
|
General information (Go to Linear View: )
|
|
Gene Name
|
ycfL
|
|
Alternative name
|
b1104,ECK1090,JW1090,o125,o125b
|
|
Location, Length
|
1,161,470 - 1,161,847
(
+
)
;
25.03
min
;
378
(bp) ,
125
(aa)
|
|
Product
|
hypothetical protein
|
|
Operon Name
|
hinT-ycfL-lpoB-thiK-nagZ-ycfP
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
1787347
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YCFL_ECOLI
(
P75946
)
|
|
- Protein name
|
Hypothetical protein ycfL.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ycfL; OrderedLocusNames=b1104;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ycfL
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein ycfL
|
|
PSI-BLAST
|
Hypothetical protein ycfL
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein b1104 [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CK2_PHOSPHO_SITE
PROKAR_LIPOPROTEIN
|
| Sequences |
Amino acid
FASTA format
|
0001 MRKGCFGLVS LVLLLLVGCR SHPEIPVNDE QSLVMESSLL AAGISAEKPF LSTSDIQPSA SSTLYNERQE
0071 PVTVHYRFYW YDARGLEMHP LERPRSVTIP AHSAVTLYGS ANFLGAHKVR LYLYL
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ATACCAACCG CCATGGCGGA CAAGAGGTTT
-070 ACCACATCCA TATGCACTTG TTGGGTGGCC GTCCGCTGGG ACCAATGCTG GCGCATAAAG GTCTGTAACG
0001 atgagaaaag gatgctttgg gctggtgtct ctggtgttgt tactgctggt gggctgtcgt tcacatccgg
0071 aaattccggt gaatgatgag caatcgctgg tgatggagtc atctttattg gctgcgggca tcagtgcaga
0141 aaagcccttc ctttcgacgt ctgatattca accttcagca tcctcaacgc tttataacga aaggcaagaa
0211 cccgttaccg ttcattatcg tttttactgg tatgacgcca gagggctgga gatgcatcct ctggaaaggc
0281 cacgcagcgt taccattccc gcacattcgg cggtaacgct gtacggcagc gccaattttc tgggggcgca
0351 caaagtcaga ctttatctat atttgtaaGG GGTGAATCTT GATGACAAAA ATGAGTCGCT ACGCCTTGAT
0421 TACCGCGCTG GCGATGTTTC TCGCCGGGTG TGTGGGGCAA CGTGAACCTG CACCGGTA
|
