|
General information
|
|
Deletion
|
OCR47-3
|
|
D or ND
|
D
|
|
Location (BP)
|
696,777 - 705,113
|
|
Length (BP)
|
8,337
|
|
Related strains
|
|
Strains
|
|
 |
|
System
|
red(SD1)
|
 |
|
Primer
|
|
Deleted Region
|
5'
|
Primer
|
R47-3A-CmN
|
|
Sequence
|
5'TAcTTATAcgccgAcTggTgAAcAccAAccgcgcgAccAgcTggTgTcccTgTTgATAcc3'
|
|
3'
|
Primer
|
R47-3B-CmC
|
|
Sequence
|
5'TggATgcgAcgcTcAAgcgTcgcATcAggcATAAAgcAgAcAcTTATTcAggcgTAgcAc3'
|
|
Sequences
|
Nucleotide
Fasta Format
View sequence out neighbor 100bp
|
-00100 CAACAAGCAC CTCAATAACT GAAACAGCCC
-00070 CGGATTTCAC CGGGGCTGTT TCGCATTTCT TACTTATACG CCGACTGGTG AACACCAACC GCGCGACCAG
000001 ACGGATCGTC CATTTTCTTG AACGCTTCAT CCCATTCGAT CGCTTTAGCG GAAGAACAAG CGACGGAAGG
000071 ACCGCCCGGC ACGCACTCAG CGGCGCTCGG AAGCGGGAAT AGTTCTTCAA AGATCTCCCG ATACAAGTAC
000141 GCTTCTTTAG AGGTTGGCGT GTTGTACGGG AAGCGGAAGC GGGCAGTTTC CAGTTGCTGA TCAGAAACCT
000211 GCTGCGCAGC CACTTCTTTC AGGGTGTCGA TCCAACTGTA ACCGACGCCA TCGGAGAACT GCTCTTTCTG
000281 CCGCCAGGCC ACGCTTGCAG GCAGATACGC TTCAAAACAT TCACGCAGGA TGTGTTTTTC CATTTTGCCG
000351 TTACCGCACA TTTTATCCTG TGGGTTAATA CGCATCGCCA CATCAAGGAA TTTTTTGTCG AGGAACGGAA
000421 CGCGTGCTTC CACGCCCCAG GCTGACATCG CTTTGTTGGC ACGCGCGCAG TCATACATAT GCAGGGCCAG
000491 CAGTTTACGC ACCGTCTCTT CATGCAGTTC TTTGGCATTC GGTGCTTTGT GGAAGTAAAG ATAACCGCCG
000561 AACACTTCAT CAGAACCTTC ACCGGACAGC ACCATTTTAA TGCCCATCGC CTTGATCTTA CGCGACATTA
000631 AATACATCGG TGTTGAAGCG CGAATAGTGG TCACATCATA AGTTTCGATG TGGTAAATCA CGTCGCGGAT
000701 GGCATCCAGA CCTTCCTGTA CAGTGAAGTG AATTTCGTGA TGCACCGTGC CCAGATGGTT TGCCACTTCC
000771 TGGGCTGCTT TCAGATCCGG TGAACCCGGC AGACCTACAG CAAAGGAGTG TAACTGCGGC CACCAGGCTT
000841 CAGAGCGTTC CTGATCTTCC ACGCGACGGG CTGCGTATTT CTTGGTGATA GCGGAAATAA TTGAGGAATC
000911 CAGACCACCA GAAAGCAGCA CACCGTAAGG CACATCAGAC ATCAGATGGC TTTTAACTGA ATCTTCCAGT
000981 GCCTGACGCA GCTCGTTTTT GTCGGTCACG TTATCTTTCA CCGCATCGTA GTCGAACCAG TCGCGATGAT
001051 AGTAAGAACG GATTTCGCCG TCCTGGCTCC ACAAATAGCT CCCCGCCGGG AACTCTTTAA TCGTGCGGCA
001121 AACTGGCACC AGCGCTTTCA TTTCTGAGGC CACATACAGC TGACCGTGTT CGTCATACCC CATATACAGT
001191 GGGATGATCC CCAGATGGTC GCGACCAATC AGGTAGGCAT CTTTTTCGCT GTCGTACAGT GCAAAGGCAA
001261 ACATGCCCTG CAAGTCGTCG AGAAATTCCG GCCCTTTTTC CTGATACAGC GCGAGGATCA CTTCACAGTC
001331 AGACCCGGTC TGGAACTGGT AACGATCGCC ATATTCGGCG CGCAATGCCT GGTGGTTGTA GATTTCACCG
001401 TTTACCGCCA GTACGTGGGT TTTTTGTTGG TTGTAGAGAG GTTGCGCCCC CGCGTTAACG TCAACAATTG
001471 ACAGACGTTC GTGGGCGAGA ATGGCGTTAT CGCTGGCATA AATACCGGAC CAGTCCGGGC CACGATGACG
001541 CATCAGGCGT GACAGCTCGA GGGCTTTCTT ACGCAGCTCA ACTGCGTCTG TTTTGATATC GAATACGCCA
001611 AAAATTGAAC ACATAACCTT CTCCGTTAAC CTGGTATTTG TTGCTTGTTG TGTTTGCTTG TTTAAAAAAA
001681 TGCCGCAAAG CAGCACTGTG CGCAAGCGAT TTGGCGGTGA AAAAATAAAA AACGTAATGG TGATTGTCGA
001751 TTGGTGAAAA AAGGTCTGGT GTGAGGATAT ATTTATTGAT GAATCGATAA TTTTTAGCGG GTTTTATTGA
001821 ATGTTTATAT TTTACGGGGG CCAAATTGCT GACAAAGTGC GATTTGTTCA TGCCGGATGC GGCGTGAACG
001891 CCTTATCCGG CCTACAAAAG CATGAAAATT CAATATATTG CAGGAGCTGC GTAGGCCTGA TAAGCGTAGC
001961 GCATCAGGCA GTTTGGCGTT TGTCATCAGA GCCAACCACG TCCGCAGACG TGGTTGCTAT TCAGATAACG
002031 TCGATTTCAG CGACTGACGG GTAAATCCAG CTGGGGCGGA AAGGCATACT GTCGATATCG TCGAGCGACG
002101 AAACACCAGA AAGCACCAGA ATCGTCTCCA GACCTGCCTG GAAGCCGGCC AGAATATCGG TACGCAGGTT
002171 ATCGCCGACA ATCACCGTTT CTTCCGAATG CGCCTGCATT TTGTTTAATG CTGCGCGGAT GATCCACGGG
002241 CTGGGCTTAC CAACATAGAA CGGTTTGCGC CCGGAGATTT TCTCAATCCC TGCACACAAC GCGCCACAAG
002311 CGGGATAAAA ACCGCGCCCG TGGGTGTCCG GATTGGTGGC GATAAAACGT GCACCGTTAG CGACGAAATA
002381 GGCTGCTTTA TGCATCATGT CCCAGTTGTA GGAACGCGTT TCGCCAACAA TCACGAAATC AGGGTTCACA
002451 TCGGTAATAG TGAAACCGGC TTTGTACAGT TCATGAATCA GTGCGCCTTC GCCCACCACA TACGCTTTCT
002521 TGCCTTCCTG GCGACGCAGG AAATCGGCAG TCGCCATCGC AGAGGTATAA AACACGCTGT CAGGTACATC
002591 GACACCTGCG GTGGCAAAGC GGTTCGCCAG ATCTTGCCCA GTCTGCGAAG GATAGTTGGT CAGCAACACC
002661 AGCGGCAGGC CTTTATCCAT AATCCCGTGC AAAAATTCCG CTGCACCCGG TACGGCGACG TTATCGTGCA
002731 TCAGCACGCC GTCGATATCG CAAATTACAT TTTTAATGGT CATGGACTAC CCAGAATATT GACAACAATA
002801 AGCGCCACTA TAAAAGCACA TTAATTTTCC AGCAAATGCT GGAGCAAAAT ACCGTTGAGC ATGGCGCGTT
002871 TTACCAGCGC AAAAGCGCCG ATTGCCGAGC GGTGATCCAG CTCAGAACGT ACCACCGGCA GATTAGTGCG
002941 AAACGCCTTC AGCGCCTGGG TATTAATGCA GCTTTCAATA GCAGGGAGCA GCACTTTATC GGCTTCGGTG
003011 ATTTCACCGG CAATAACAAT TTTTTGCGGA TTAAATAAGT TGATAGCAAT GGCGATGGTT TTACCCAGAT
003081 GACGACCGAC ATACTCAATT ACTTCCGACG CCAGACTATC GCCTTTGTTC GCGGCTTTGC AGATAGTTTT
003151 GATGGTGCAG TCGTCCAGCG GCACGCGGCT CTGGTAGCCC TGCTTTAACA GATTCAACAC CCGTTGTTCA
003221 ATGGCAGCGT TGGCAGCGAT AGTTTCCAGG CAGCCAAAGT TGCCGCAGTG GCAGCGTTCA CCCAGCGGTT
003291 CGACCTGAAT ATGGCCAATT TCACCGACGT TGCCGTTGCG GCCAATAAAA ATGCGCCCGT TAGAGATAAT
003361 CCCGGCCCCG GTTCCGCGAT GGACACGCAC CAGAATGGAG TCTTCGCAAT CCTGACTTGC ACCGAAGTAG
003431 TGCTCCGCCA GCGCCAGACT ACGGATATCG TGACCAACGA AACAGGTCAC TTTAAAACGT TCTTCCAGAG
003501 CTTCTACCAG CCCCCAGTTT TCTACCTGAA TATGCGGCAT GTAATGAATT TTGCCGCTGT CCGGGTCAAC
003571 AAGCCCTGGC AGGATCACCG AAATCGCGAT CAGCTCGCGC AGTTTGCGCT GGTAGCTATC AATAAACTGA
003641 GCAATGGCAT TCAACAGGGC ATGTTCCAGC GTTTGCTGGG TACGTTCCGG CAGCGGGTAA TGTTCTTCTG
003711 CCAGCACTTT GCTGCTGAGA TCAAACAGAG TGATGGTGGC GTCATGACGA CCAAGCCGTA CGCCGATTGC
003781 GTGGAAATTG CGGGTTTCGG TGACGATGGA GATAGCGCGG CGGCCCCCGG TGGAGGCCTG CTGATCAACT
003851 TCTTTGATCA GCCCGCGTTC GATAAGCTGA CGCGTAATTT TGGTTACGCT GGCGGGGGCA AGCTGGCTTT
003921 GCTCGGCAAT CTGAATCCGC GAGATTGGCC CGTACTGGTC AATCAGGCGA TAAACCGCCG CGCTGTTAAG
003991 CTGTTTTACG AGATCAACAT TACCTATCTG AGCTTGTCCG CCTGGTGTCA TACTTTCTCT TATTGAGTTA
004061 CGACCTCGTT ACCGTTAACG ATGGTCTTGG TGATTTTAAA ATCAGGTGTG AATGCAGTCA GGTTGGCTAC
004131 TTTACCTGCG GCGAGTGTGC CGAGACGTTT CTCAACGCCA ATCGCACGCG CCGGATAGAG CGTCGCCATA
004201 CGTAGCACTT CATCCAGTGC GATACCGCAA TGTTCGACCA GATTACGCAC GCCTTCAATC ATGGTTAAGG
004271 ATGAACCGCT TAACGTACCG TTCTCATCCA CACAAAGTCC GTTACGGTAG TATATTGTTT TACCCGCAAA
004341 AATGAACTGT TCAATGTTGG CACCTGCTGG CGCGGTGGCG TCAGTAACCA GACACAGTTT GTCGCCTTTC
004411 AGACGTTTAG CGTTGCGAAT GTTGGCGTAA TCAACATGCA GGCCATCAGC AATAATACCG CAATAAATGT
004481 CAGCTTCGTC GAGGATCGCG CCCGCCAGGC CAGGTTCACG ACCGGTAATA TACGGCATCG CGTTGTACAG
004551 ATGGGTGGCA AAGGTAATCC CCGCGCGGAA ACCGGCTTTT GCTTCTTTCA ACGTCGCGTT GGAGTGACCG
004621 GCAGAAACCA CAATCCCGGC ATTTGCCAGT TTGCTGATGA CTTCCGCAGG AACCATTTCC GGTGCCAGGG
004691 TCACTTTGGT AATGACGTCG GCGTTTTCAC ACAGGAAATC GACCAGCGCG GCATCAGGCT TACGCACAAA
004761 ATTCGGATTA TGGGTGCCTT TTTTTACCAG ATTCAGCCAC GGACCTTCCA GATGCAGACC TAACGCCTGA
004831 TTCGGATGTT TTGCCAGGTA CTCGCGCATA ACGCGCACGC CCTGTTTCAT CAGCTCATCG CTGGTGGTGA
004901 TAAGCGTCGG CAGATAGTTA GTACAGCCTG ATTTCTCATT GGCTTTCTGC ATGATTTCCA GCGTTTCCAC
004971 GCTGACCGCT TCAGCGGTGT CGTTAAACTG TACGCCGCCG CAGCCGTTTA ACTGCACATC GATAAAACCG
005041 GGGGAGAGAA TGGCCCCGTT CAGTGAACGT TGTTCGATCT CTGGCGGCAG TTCCGCTACC GGACAGACGC
005111 TTTTAATCAG GCCATCAGCG ATAACAACCG CGTGGTCATC AAGAAATTCG TGGCCGGTAA AGATCCGGCC
005181 CTGGGTTAAT GCATACATTC TGACCCCCGA TTTTAAAAAA TATTGCCCTG AGCAAGGAGC CAGGGCAGGG
005251 ATAACAATTA CAGACCTTTG ATATTTTCTG CTTCTAATTC ATTGAAATAT CTTAAAGTCT TAACTTTCAG
005321 CTCCATGGTG GAAGGTTCAT CGCACACCAT GATCGCTTTC GGATGCAGTT GCAGACAGCT GATGGTCCAC
005391 ATATGGTTCA CGCAACCTTC AACGGCGGCC TGCAGCGCCA GTGCTTTCTG GCTACCCAGC ACCAGAATCA
005461 TCACTTCTTC GGCATCCAGC AGTGTACCAA CACCGACAGT CAGGGCATAT TTTGGCACCT GATTAACATC
005531 GTTATCAAAG AAACGAGAGT TTGCGACGCG AGTGTCATGA GTCAGGGTTT TGATACGAGT ACGAGAAGCC
005601 AGAGAAGACG CCGGTTCGTT AAATGCAATA TGACCGTCGT TACCTACACC GCCCATAAAC AGATGAATTT
005671 TTCCGTAAGA ACGGATTTTT TCTTCATACT GGCGGCACTC GGCGTCGATA TCCGGGGCGT TGCCGTTGAG
005741 AAGGTTGATG TTTTCTGCTG GAATATCAAC GTGATCGAAG AAATTACGGT GCATAAAGCT GTAGTAGCTT
005811 TCCGGATGCT CTTTCGGCAG ACCGACATAT TCGTCCATGT TGAAGGTGAC AACGTGCTTA AAGCTGACCT
005881 GGCCTGCTTT ATGCATTTCG ACTAACGCTT TATAGGTGGT CATCGGCGTG CCGCCAGTCG GCAGGCCCAG
005951 TACAAACGGA CGATCGGCAG TCGGTTTGAA CGCATTGATA CGATTGACGA TATGGCGAGC AGCCCATTTG
006021 CCGACCTGTT CAGCGGTAGT CAGGGGGATC AGTCTCATTA TTCACCTCAA TAAGTAAAAT GTAAGCCGTT
006091 GGCGGATTAG GCATCTTTAA GCGTAACCTG GATTTGCGCA GACAGGCGTC AATCCGACCT GATTTTTTGA
006161 ATGATAAAAT AAGTTTTCTG GTTTAGCCAG TAAAAGGGAG TGATAATAAC GATATTTGGT GACAAAACTC
006231 ACAAAAGACA CGCGTTTAAT TTGCGATACG AATTAAATTT TCACACACTC TGTAGCAGAT GATCTAACAA
006301 TCTGATTACA GAACATCGGC AGTACAATTT GCAGCAAAAT AAAAATACGG CTTGAAACGA GCCAAATAGG
006371 GTTCTCGTAG GGGGAATAAG ATGAATATTT TAGGTTTTTT CCAGCGACTC GGTAGGGCGT TACAGCTCCC
006441 TATCGCGGTG CTGCCGGTGG CGGCACTGTT GCTGCGATTC GGTCAGCCAG ATTTACTTAA CGTTGCGTTT
006511 ATTGCCCAGG CGGGCGGTGC GATTTTTGAT AACCTCGCAT TAATCTTCGC CATCGGTGTG GCATCCAGCT
006581 GGTCGAAAGA CAGCGCTGGT GCGGCGGCGC TGGCGGGTGC GGTAGGTTAC TTTGTGTTAA CCAAAGCGAT
006651 GGTGACCATC AACCCAGAAA TTAACATGGG TGTACTGGCG GGTATCATTA CCGGTCTGGT TGGTGGCGCA
006721 GCCTATAACC GTTGGTCCGA TATTAAACTG CCGGACTTCC TGAGCTTCTT CGGCGGCAAA CGCTTTGTGC
006791 CGATTGCCAC CGGATTCTTC TGCCTGGTGC TGGCGGCCAT TTTTGGTTAC GTCTGGCCGC CGGTACAGCA
006861 CGCTATCCAT GCAGGCGGCG AGTGGATCGT TTCTGCGGGC GCGCTGGGTT CCGGTATCTT TGGTTTCATC
006931 AACCGTCTGC TGATCCCAAC CGGTCTGCAT CAGGTACTGA ACACCATCGC CTGGTTCCAG ATTGGTGAAT
007001 TCACCAACGC GGCGGGTACG GTTTTCCACG GTGACATTAA CCGCTTCTAT GCCGGTGACG GCACCGCGGG
007071 GATGTTCATG TCCGGCTTCT TCCCGATCAT GATGTTCGGT CTGCCGGGTG CGGCGCTGGC GATGTACTTC
007141 GCAGCACCGA AAGAGCGTCG TCCGATGGTT GGCGGTATGC TGCTTTCTGT TGCTGTTACT GCGTTCCTGA
007211 CCGGTGTGAC TGAGCCGCTG GAATTCCTGT TCATGTTCCT TGCTCCGCTG CTGTACCTCC TGCACGCACT
007281 GCTGACCGGT ATCAGCCTGT TTGTGGCAAC GCTGCTGGGT ATCCACGCGG GCTTCTCTTT CTCTGCGGGG
007351 GCTATCGACT ACGCGTTGAT GTATAACCTG CCGGCCGCCA GCCAGAACGT CTGGATGCTG CTGGTGATGG
007421 GCGTTATCTT CTTCGCTATC TACTTCGTGG TGTTCAGTTT GGTTATCCGC ATGTTCAACC TGAAAACGCC
007491 GGGTCGTGAA GATAAAGAAG ACGAGATCGT TACTGAAGAA GCCAACAGCA ACACTGAAGA AGGTCTGACT
007561 CAACTGGCAA CCAACTATAT TGCTGCGGTT GGCGGCACTG ACAACCTGAA AGCGATTGAC GCCTGTATCA
007631 CCCGTCTGCG CCTTACAGTG GCTGACTCTG CCCGCGTTAA CGATACGATG TGTAAACGTC TGGGTGCTTC
007701 TGGGGTAGTG AAACTGAACA AACAGACTAT TCAGGTGATT GTTGGCGCGA AAGCAGAATC CATCGGCGAT
007771 GCGATGAAGA AAGTCGTTGC CCGTGGTCCG GTAGCCGCTG CGTCAGCTGA AGCAACTCCG GCAACTGCCG
007841 CGCCTGTAGC AAAACCGCAG GCTGTACCAA ACGCGGTATC TATCGCGGAG CTGGTATCGC CGATTACCGG
007911 TGATGTCGTG GCACTGGATC AGGTTCCTGA CGAAGCATTC GCCAGCAAAG CGGTGGGTGA CGGTGTGGCG
007981 GTGAAACCGA CAGATAAAAT CGTCGTATCA CCAGCCGCAG GGACAATCGT GAAAATCTTC AACACCAACC
008051 ACGCGTTCTG CCTGGAAACC GAAAAAGGCG CGGAGATCGT CGTCCATATG GGTATCGACA CCGTAGCGCT
008121 GGAAGGTAAA GGCTTTAAAC GTCTGGTGGA AGAGGGTGCG CAGGTAAGCG CAGGGCAACC GATTCTGGAA
008191 ATGGATCTGG ATTACCTGAA CGCTAACGCC CGCTCGATGA TTAGCCCGGT GGTTTGCAGC AATATCGACG
008261 ATTTCAGTGG CTTGATCATT AAAGCTCAGG GCCATATTGT GGCGGGTCAA ACACCGCTGT ATGAAATCAA
008331 AAAGTAATCT GCTTTATGCC TGATGCGACG CTTGAGCGTC GCATCCAACA ATGACAAGCG GTGGAGATCT
008401 TCTCTGCCGC TTTTTTTTTC ATCAATCATC CCCATAA
|