|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL35
(D)
,
OCL35-12
(D)
,
OCL35-13
(D)
,
OCL35-4
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
sibD
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
sibD
Search strains by all related name:
sibD b4447 C0730 ECK3041 IS156 JWR0251 QUAD1d rygD tp8
|
General information (Go to Linear View: )
|
|
misc_RNA Name
|
sibD
|
|
Alternative name
|
b4447,C0730,ECK3041,IS156,JWR0251,QUAD1d,rygD,tp8
|
|
Location, Length
|
3,192,745 - 3,192,887
(
-
)
;
68.81
min
;
143
(bp) ,
|
|
Product
|
sRNA antisense regulator of toxic IbsD protein
|
|
Operon Name
|
|
|
Note
|
identified in a large scale screen
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Nucleotide
FASTA format
View sequence in neighbor 100bp
|
0001 acaagggtga gggaggattt ctcccccctc tgattggctg ttaataagct gcgaaactta cgagtaacaa
0071 cacaatcagt atgatgacga gcttcatcat aaccctttcc ttctgtaagg cccccttctt cgggaggggc
0141 ttt
|
