|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ydaQ
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ydaQ
Search strains by all related name:
ydaQ b1346 ECK1343 f79 JW5207
|
General information (Go to Linear View: )
|
|
Gene Name
|
ydaQ
|
|
Alternative name
|
b1346,ECK1343,f79,JW5207
|
|
Location, Length
|
1,411,261 - 1,411,476
(
-
)
;
30.42
min
;
216
(bp) ,
71
(aa)
|
|
Product
|
Rac prophage; conserved protein
|
|
Operon Name
|
recET-lar-ydaCQ-intR
|
|
Note
|
putative lambdoid prophage Rac excisionase
|
|
Function
|
Phage or Prophage Related
|
|
Gene Ontology
|
|
|
PID
|
87081882
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YDAQ_ECOLI
(
P76057
)
|
|
- Protein name
|
Hypothetical protein ydaQ.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ydaQ; OrderedLocusNames=b1346;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ydaQ
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein ydaQ
|
|
PSI-BLAST
|
Hypothetical protein ydaQ
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein ECs1930 [Escherichia coli O157:H7 str. Sakai]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
RGD
|
| Sequences |
Amino acid
FASTA format
|
0001 MAQVIFNEEW MVEYGLMLRT GLGARQIEAY RQNCWVEGFH FKRVSPLGKP DSKRGIIWYN YPKINQFIKD
0071 S
|
Nucleotide
FASTA format
View sequence in neighbor 100bp
|
0001 atggcacaag taatctttaa tgaagagtgg atggttgaat acggcctgat gcttcgcact ggtctggggg
0071 ccagacaaat tgaagcatac cgccagaact gttgggtgga gggcttccac ttcaaacgag tatctccttt
0141 aggtaagcca gacagcaaac gagggattat ctggtacaac tatccaaaga taaatcagtt tatcaaagac
0211 tcatga
|
