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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
|
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Deletion
|
15
(LD)
,
DE(pgl-grxA)502
,
15+dps
(LD)
,
OCR48,50-8 (LD 15D::Cm)
(D)
|
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Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
gsiD
|
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Related strains
|
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Strains Search
|
Search strains by gene name:
gsiD
Search strains by all related name:
gsiD b0832 ECK0822 JW0816 o303 o303a yliD
|
General information (Go to Linear View: )
|
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Gene Name
|
gsiD
|
|
Alternative name
|
b0832,ECK0822,JW0816,o303,o303a,yliD
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|
Location, Length
|
871,113 - 872,024
(
+
)
;
18.78
min
;
912
(bp) ,
303
(aa)
|
|
Product
|
glutathione transporter, permease component, ABC superfamily
|
|
Operon Name
|
iaaA-gsiABCD
|
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Note
|
putative transport system permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
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Function
|
putative transport; Not classified
|
|
Gene Ontology
|
GO:0005215
;
transporter activity ( gsiD )
GO:0005886
;
plasma membrane ( gsiD )
GO:0006810
;
transport ( gsiD )
GO:0016020
;
membrane ( gsiD )
GO:0016021
;
integral to membrane ( gsiD )
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|
PID
|
1787054
|
EC number
(KEGG Pathway)
|
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SWISS-PROT
(
Show simple
)
|
Entry name(Acc.no)
|
DPPC_ECOLI
(
P37315
)
|
|
- Protein name
|
Dipeptide transport system permease protein dppC.
|
|
- Synonyms
|
|
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- Gene name
|
Name=dppC; OrderedLocusNames=b3542, c4357, z4959, ECs4422;
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- Comments
|
FUNCTION:Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane.
SUBCELLULAR LOCATION:Integral membrane protein. Inner membrane.
SIMILARITY:Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily.
|
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Entry name(Acc.no)
|
YLID_ECOLI
(
P75799
)
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- Protein name
|
Hypothetical ABC transporter permease protein yliD.
|
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- Synonyms
|
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- Gene name
|
Name=yliD; OrderedLocusNames=b0832;
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|
- Comments
|
FUNCTION:Probably part of the binding-protein-dependent transport system yliABCD; probably responsible for the translocation of the substrate across the membrane.
SUBCELLULAR LOCATION:Integral membrane protein. Inner membrane (By similarity).
SIMILARITY:Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily.
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
yliD
(
homologous genes of other bacterias
)
|
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PDB
(database updated :
2007.02.20
)
|
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PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical ABC transporter permease protein yliD
|
|
PSI-BLAST
|
Hypothetical ABC transporter permease protein yliD
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted peptide transporter subunit: membrane component of ABC superfamily [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
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Pfam
|
|
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PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
BPD_TRANSP_INN_MEMBR
|
| Sequences |
Amino acid
FASTA format
|
0001 MRLFNWRRQA VLNAMPLVKP DQVRTPWHEF WRRFRRQHMA MTAALFVILL IVVAIFARWI APYDAENYFD
0071 YDNLNNGPSL QHWFGVDSLG RDIFSRVLVG AQISLAAGVF AVFIGAAIGT LLGLLAGYYE GWWDRLIMRI
0141 CDVLFAFPGI LLAIAVVAVL GSGIANVIIA VAIFSIPAFA RLVRGNTLVL KQQTFIESAR SIGASDMTVL
0211 LRHILPGTVS SIVVFFTMRI GTSIISAASL SFLGLGAQPP TPEWGAMLNE ARADMVIAPH VAVFPALAIF
0281 LTVLAFNLLG DGLRDALDPK IKG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AGGCGGAAAT TCTGCTTTTC TCGCTGGAAT
-070 TTATTCTTAT CAACTTAGTG GTGGATGTGC TTTACGCCGC CATTAACCCG GCTATCAGGT ACAAGTAAGG
0001 atgcgactat ttaactggcg acgtcaggcg gtgttaaacg ccatgccact ggtcaaacct gaccaggtac
0071 gtacaccgtg gcatgaattc tggcgacgat ttcgccgtca gcatatggcg atgaccgccg cattattcgt
0141 tattttattg attgtggtgg ccatttttgc acgctggatc gctccctatg acgccgaaaa ttattttgat
0211 tatgacaatc tgaataacgg accttctttg cagcactggt ttggcgtcga ttcactgggg cgtgacattt
0281 tcagccgtgt cctggttggt gcgcaaatct cgctggcggc gggcgtgttt gccgtgttta tcggtgcggc
0351 gatcgggacg ttgctgggct tgctcgctgg atattatgaa ggctggtggg atcggctgat catgcgcatt
0421 tgcgatgtgc tgtttgcctt cccgggtatt ttactggcga tcgctgttgt tgcggtgttg ggaagcggca
0491 ttgctaacgt gattattgca gtcgccattt tttccatccc cgcgtttgcc cgcctggtgc gcggcaacac
0561 gctggtgttg aaacagcaaa cctttattga gtcagcacgc agtattggtg ccagcgatat gaccgttttg
0631 ttgcgtcata tcctgcctgg gaccgtctct tctatcgtgg tgtttttcac catgcgcatt ggtacctcga
0701 ttatctctgc cgccagcctc tcatttctcg gcctcggtgc gcagccgccg acaccagagt ggggagcaat
0771 gctcaatgag gctcgagcgg atatggttat cgcgccgcat gtcgctgttt ttccggccct ggctattttt
0841 ctgaccgtac tggcgttcaa tttgttgggc gatggtttac gcgatgcgct ggatccgaaa attaaaggat
0911 agTTACGTTT GAATATTGCT TGAAAGGGTA ATCACCTCAC AGGAAATTAT TGCCCTAAGC AAGTGTTGTA
0981 ACTTTCTGCT GATTTTGTAG AATCGGGTAA TT
|
