|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
15
(LD)
,
DE(pgl-grxA)502
,
DE(glnP-moeA)454
,
15+dps
(LD)
,
OCR48,50-8 (LD 15D::Cm)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ybiV
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ybiV
Search strains by all related name:
ybiV b0822 ECK0812 f271 f271b JW0806 supH
|
General information (Go to Linear View: )
|
|
Gene Name
|
ybiV
|
|
Alternative name
|
b0822,ECK0812,f271,f271b,JW0806,supH
|
|
Location, Length
|
858,436 - 859,251
(
-
)
;
18.50
min
;
816
(bp) ,
271
(aa)
|
|
Product
|
sugar phosphatase; preference for fructose-1-P, ribose-5-P and glucose-6-P
|
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Operon Name
|
ybiV
|
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Note
|
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Function
|
|
|
Gene Ontology
|
GO:0000287
;
magnesium ion binding ( supH )
GO:0003824
;
catalytic activity ( supH )
GO:0008152
;
metabolic process ( supH )
GO:0016787
;
hydrolase activity ( supH )
GO:0046872
;
metal ion binding ( supH )
GO:0050308
;
sugar-phosphatase activity ( supH )
|
|
PID
|
1787043
|
EC number
(KEGG Pathway)
|
|
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SWISS-PROT
(
Show simple
)
|
Entry name(Acc.no)
|
YIDA_ECOLI
(
P09997
;
P76737
)
|
|
- Protein name
|
Hypothetical protein yidA.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yidA; OrderedLocusNames=b3697, c4619, SF3767, S4004;
|
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- Comments
|
SIMILARITY:Belongs to the cof family.
|
|
Entry name(Acc.no)
|
YBIV_ECOLI
(
P75792
)
|
|
- Protein name
|
Hypothetical protein ybiV.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ybiV; OrderedLocusNames=b0822;
|
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- Comments
|
SIMILARITY:Belongs to the cof family.
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Homology Analysis
|
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BLAST
|
|
Bacteria
|
|
GTOP
|
ybiV
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of Ybiv From Escherichia Coli K12
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Sugar phosphatase supH
|
|
PSI-BLAST
|
Sarcoplasmic/endoplasmic reticulum calcium ATPase 3
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted hydrolase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
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Pfam
|
|
|
PROSITE
|
|
PROSITE
|
GLYCOSAMINOGLYCAN
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
COF_2
|
| Sequences |
Amino acid
FASTA format
|
0001 MSVKVIVTDM DGTFLNDAKT YNQPRFMAQY QELKKRGIKF VVASGNQYYQ LISFFPELKD EISFVAENGA
0071 LVYEHGKQLF HGELTRHESR IVIGELLKDK QLNFVACGLQ SAYVSENAPE AFVALMAKHY HRLKPVKDYQ
0141 EIDDVLFKFS LNLPDEQIPL VIDKLHVALD GIMKPVTSGF GFIDLIIPGL HKANGISRLL KRWDLSPQNV
0211 VAIGDSGNDA EMLKMARYSF AMGNAAENIK QIARYATDDN NHEGALNVIQ AVLDNTSPFN S
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 catcaatttc atccttactt tcattcgaaa
-070 tataatttgt gctctgcgtc acattgttat tacactgtta cggtttcatt ttcgagccag gagcacacct
0001 atgagcgtaa aagttatcgt cacagacatg gacggtactt ttcttaacga cgccaaaacg tacaaccaac
0071 cacgttttat ggcgcaatat caggaactga aaaagcgcgg cattaagttc gttgttgcca gcggtaatca
0141 gtattaccag cttatttcat tctttcctga gctaaaggat gagatctctt ttgtcgcgga aaacggcgca
0211 ctggtttacg aacatggcaa gcagttgttc cacggcgaac tgacccgaca tgaatcgcgg attgttattg
0281 gcgagttgct aaaagataag caactcaatt ttgtcgcctg cggtctgcaa agtgcatatg tcagcgaaaa
0351 tgcccccgaa gcatttgtcg cactgatggc aaaacactac catcgcctga aacctgtaaa agattatcag
0421 gagattgacg acgtactgtt caagttttcg ctcaacctgc cggatgaaca aatcccgtta gtgatcgaca
0491 aactgcacgt agcgctcgat ggcattatga aacccgttac cagtggtttt ggctttatcg acctgattat
0561 tcccggtcta cataaagcaa acggtatttc gcggttactg aaacgctggg atctgtcacc gcaaaatgtg
0631 gtagcgattg gcgacagcgg taacgatgcg gagatgctga aaatggcgcg ttattccttt gcgatgggca
0701 atgctgcgga aaacattaaa caaatcgccc gttacgctac cgatgataat aatcatgaag gcgcgctgaa
0771 tgtgattcag gcggtgctgg ataacacatc cccttttaac agctgacctc tctaccggag ccgtgcgctc
0841 cggttttccc ttctttttac atcctgtaca tcacatcaaa tcattaaact tgcattaact tatttataac
0911 ttatat
|
