MG1655
W3110
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Gene Report : ybhF
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion 15 (LD)  ,  DE(pgl-grxA)502  ,  15+dps (LD)  ,  OCR48,50-8 (LD 15D::Cm) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  ybhF
Related strains
     Strains Search Search strains by gene name:  ybhF   Search strains by all related name:  ybhF b0794 ECK0783 f583 JW5104

General information  (Go to Linear View:)
 Gene Name ybhF  
 Alternative name b0794,ECK0783,f583,JW5104  
 Location, Length 826,468 - 828,204 (  -  ) ;   17.81 min ; 1737 (bp) ,   578 (aa) Go to Linear View
 Product fused predicted transporter subunits of ABC superfamily: ATP-binding components  
 Operon Name ybiH-ybhGFSR  
 Note putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm  
 Function putative transport; Not classified  
 Gene Ontology GO:0000166 ; nucleotide binding ( ybhF )
GO:0005515 ; protein binding ( ybhF )
GO:0005524 ; ATP binding ( ybhF )
GO:0006810 ; transport ( ybhF )
GO:0016887 ; ATPase activity ( ybhF )
GO:0017111 ; nucleoside-triphosphatase activity ( ybhF )
 PID 87081782  
 EC number
  (KEGG Pathway)   		 
SWISS-PROT  ( Show simple )
  botton Entry name(Acc.no) YBHF_ECOLI ( P75776 ; Q9R7S3; Q9R7S4 )
    -  Protein name Hypothetical ABC transporter ATP-binding protein ybhF.  
    -  Synonyms  
    -  Gene name Name=ybhF; OrderedLocusNames=b0794, SF0744, S0785;  
    -  Comments
  • SIMILARITY:Belongs to the ABC transporter family.  
    •   botton Entry name(Acc.no) Q8FJN7 ( Q8FJN7 )
        -  Protein name Hypothetical ABC transporter ATP-binding protein ybhF.  
        -  Synonyms  
        -  Gene name Name=ybhF; OrderedLocusNames=c0877;  
        -  Comments
  • SIMILARITY:Belongs to the ABC transporter family.  
    •   botton Entry name(Acc.no) Q8X7Z1 ( Q8X7Z1 )
        -  Protein name Putative ATP-binding component of a transport system.  
        -  Synonyms  
        -  Gene name Name=ybhF; OrderedLocusNames=z1014;  
        -  Comments
  • SIMILARITY:Belongs to the ABC transporter family.  

    •  Linear View (Whole Mode)
    View Location
       815.0  –  840.0 (KBP)

    Homology Analysis
    BLAST
        Bacteria
             GTOP ybhF (  homologous genes of other bacterias  )  
        PDB     (database updated : 2007.02.20 )
             PSI-BLAST Chain A, Structure Of Yeast Elongation Factor 3 In Complex With Adpnp  
        SWISS-PROT     (database updated : 2007.02.20 )
             BLAST Hypothetical ABC transporter ATP-binding protein ybhF  
             PSI-BLAST Hypothetical ABC transporter ATP-binding protein ybhF
        nr     (database updated : 2007.02.20 )
             BLAST putative ATP-binding component of a transport system [Shigella flexneri 2a str. 301]  
    Pfam 28.0   (database updated : 2015-05 )
        Pfam
    PROSITE
        PROSITE ASN_GLYCOSYLATION    CAMP_PHOSPHO_SITE    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    MYRISTYL    ATP_GTP_A    ABC_TRANSPORTER     

    Other Cross-Reference
        COG COG1131V 
        EcoCyc ybhF 

    Sequences
    Amino acid
    FASTA format 
    0001 MNDAVITLNG LEKRFPGMDK PAVAPLDCTI HAGYVTGLVG PDGAGKTTLM RMLAGLLKPD SGSATVIGFD 
0071 PIKNDGALHA VLGYMPQKFG LYEDLTVMEN LNLYADLRSV TGEARKQTFA RLLEFTSLGP FTGRLAGKLS 
0141 GGMKQKLGLA CTLVGEPKVL LLDEPGVGVD PISRRELWQM VHELAGEGML ILWSTSYLDE AEQCRDVLLM 
0211 NEGELLYQGE PKALTQTMAG RSFLMTSPHE GNRKLLQRAL KLPQVSDGMI QGKSVRLILK KEATPDDIRH 
0281 ADGMPEININ ETTPRFEDAF IDLLGGAGTS ESPLGAILHT VEGTPGETVI EAKELTKKFG DFAATDHVNF 
0351 AVKRGEIFGL LGPNGAGKST TFKMMCGLLV PTSGQALVLG MDLKESSGKA RQHLGYMAQK FSLYGNLTVE 
0421 QNLRFFSGVY GLRGRAQNEK ISRMSEAFGL KSIASHATDE LPLGFKQRLA LACSLMHEPD ILFLDEPTSG 
0491 VDPLTRREFW LHINSMVEKG VTVMVTTHFM DEAEYCDRIG LVYRGKLIAS GTPDDLKAQS ANDEQPDPTM 
0561 EQAFIQLIHD WDKEHSNE
    Nucleotide
    FASTA format

    View sequence out neighbor 100bp 
    -100                                             accgacctcg tctatcgcct gcgtattgtg 
-070 gtgaccgacg ccgatgatgc gttacgccag ggaatgccag tgacggtaca attcggtgac gaggcaggac 
0001 atgaatgatg ccgttatcac gctgaacggc ctggaaaaac gctttccggg catggacaag cccgccgtcg 
0071 cgccgctcga ttgtaccatt cacgccggtt atgtgacggg gttggtgggg ccggacggtg caggtaaaac 
0141 cacgctgatg cggatgttgg cgggattact gaaacccgac agcggcagtg ccacggtgat tggctttgat 
0211 ccgatcaaaa acgacggcgc gctgcacgcc gtgctcggtt atatgccgca gaaatttggt ctgtatgaag 
0281 atctcacggt gatggagaac ctcaatctgt acgcggattt gcgcagcgtc accggcgagg cacgtaagca 
0351 aacttttgct cgcctgctgg agtttacgtc tcttgggccg tttaccggac gcctggcggg caagctctcc 
0421 ggtgggatga aacaaaaact cggtctggcc tgtaccctgg tgggcgaacc gaaagtgttg ctgctcgatg 
0491 aacccggcgt cggcgttgac cctatctcac ggcgcgaact gtggcagatg gtgcatgagc tggcgggcga 
0561 agggatgtta atcctctgga gtacctcgta tctcgacgaa gccgagcagt gccgtgacgt gttactgatg 
0631 aacgaaggcg agttgctgta tcagggagaa ccaaaagccc tgacacaaac catggccgga cgcagctttc 
0701 tgatgaccag tccacacgag ggcaaccgca aactgttgca acgcgccttg aaactgccgc aggtcagcga 
0771 cggcatgatt caggggaaat cggtacgtct gatcctcaaa aaagaggcca caccagacga tattcgccat 
0841 gccgacggga tgccggaaat caacatcaac gaaactacgc cgcgttttga agatgcgttt attgatttgc 
0911 tgggcggtgc cggaacctcg gaatcgccgc tgggcgcaat attacatacg gtagaaggca cacccggcga 
0981 gacggtgatc gaagcgaaag aactgaccaa gaaatttggg gattttgccg ccaccgatca cgtcaacttt 
1051 gccgttaaac gtggggagat ttttggtttg ctggggccaa acggcgcggg taaatcgacc acctttaaga 
1121 tgatgtgcgg tttgctggtg ccgacttccg gccaggcgct ggtgctgggg atggatctga aagagagttc 
1191 cggtaaagcg cgccagcatc tcggctatat ggcgcaaaaa ttttcgctct acggtaacct gacggtcgaa 
1261 cagaatttac gctttttctc tggtgtgtat ggcttacgcg gtcgggcgca gaacgaaaaa atctcccgca 
1331 tgagcgaggc gttcggcctg aaaagtatcg cctcccacgc caccgatgaa ctgccattag gttttaaaca 
1401 gcggctggcg ctggcctgtt cgctgatgca tgaaccggac attctgtttc tcgacgaacc gacttccggc 
1471 gttgaccccc tcacccgccg tgaattttgg ctgcacatca acagcatggt agagaaaggc gtcacggtga 
1541 tggtcaccac ccactttatg gatgaagcgg aatattgcga ccgcatcggc ctggtgtacc gcgggaaatt 
1611 aatcgccagc ggcacgccgg acgatttgaa agcacagtcg gctaacgatg agcaacccga tcccaccatg 
1681 gagcaagcct ttattcagtt gatccacgac tgggataagg agcatagcaa tgagtaaccc gatcctgtcc 
1751 tggcgtcgcg tacgggcgct gtgcgttaaa gagacgcggc agatcgttcg cgatccgagt agctggctga 
1821 ttgcggtagt gatcccg