MG1655
W3110
Search for
Japanese | English
Top Genes Deletions Circular Linear Motif Contigs Reference SequenceCutter Download Strains TEC
Gene Report : yjjK
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion DE(deoD-arcA)253  ,  OCR26,27-5 (D)  ,  OCR27-7 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  yjjK
Related strains
     Strains Search Search strains by gene name:  yjjK   Search strains by all related name:  yjjK b4391 ECK4383 f555 JW4354

General information  (Go to Linear View:)
 Gene Name yjjK  
 Alternative name b4391,ECK4383,f555,JW4354  
 Location, Length 4,626,878 - 4,628,545 (  -  ) ;   99.72 min ; 1668 (bp) ,   555 (aa) Go to Linear View
 Product fused predicted transporter subunits of ABC superfamily: ATP-binding components  
 Operon Name yjjK  
 Note putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm  
 Function putative transport; Not classified  
 Gene Ontology GO:0000166 ; nucleotide binding ( yjjK )
GO:0005515 ; protein binding ( yjjK )
GO:0005524 ; ATP binding ( yjjK )
GO:0006810 ; transport ( yjjK )
GO:0016887 ; ATPase activity ( yjjK )
GO:0017111 ; nucleoside-triphosphatase activity ( yjjK )
 PID 2367384  
 EC number
  (KEGG Pathway)   		 
Verified Protein Starts (data compiled from literature and appropriate citations are available from EcoGene)
     EcoGene yjjK ( EG12343 )  
    Number of removed 1 aa cleaved  
SWISS-PROT  ( Show simple )
  botton Entry name(Acc.no) YJJK_ECOLI ( P37797 )
    -  Protein name ABC transporter ATP-binding protein yjjK.  
    -  Synonyms  
    -  Gene name Name=yjjK; OrderedLocusNames=b4391, z5993, ECs5349, SF4423, S4694;  
    -  Comments
  • SIMILARITY:Belongs to the ABC transporter family. EF3 subfamily.  
    •   botton Entry name(Acc.no) Q8FA43 ( Q8FA43 )
        -  Protein name ABC transporter ATP-binding protein yjjK.  
        -  Synonyms  
        -  Gene name Name=yjjK; OrderedLocusNames=c5478;  
        -  Comments
  • SIMILARITY:Belongs to the ABC transporter family.  

    •  Linear View (Whole Mode)
    View Location
       4615.0  –  4639.675 (KBP)

    Homology Analysis
    BLAST
        Bacteria
             GTOP yjjK (  homologous genes of other bacterias  )  
        PDB     (database updated : 2007.02.20 )
             PSI-BLAST Chain A, Rnase-L Inhibitor  
        SWISS-PROT     (database updated : 2007.02.20 )
             BLAST ABC transporter ATP-binding protein yjjK  
             PSI-BLAST Putative cobalt import ATP-binding protein cbiO 6
        nr     (database updated : 2007.02.20 )
             BLAST putative ATP-binding component of ABC transport system [Escherichia coli O157:H7 EDL933]  
    Pfam 28.0   (database updated : 2015-05 )
        Pfam
    PROSITE
        PROSITE ASN_GLYCOSYLATION    CAMP_PHOSPHO_SITE    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    TYR_PHOSPHO_SITE    MYRISTYL    AMIDATION    ATP_GTP_A    ABC_TRANSPORTER     

    Other Cross-Reference
        COG COG0488R 
        EcoCyc yjjK 

    Sequences
    Amino acid
    FASTA format 
    0001 MAQFVYTMHR VGKVVPPKRH ILKNISLSFF PGAKIGVLGL NGAGKSTLLR IMAGIDKDIE GEARPQPDIK 
0071 IGYLPQEPQL NPEHTVRESI EEAVSEVVNA LKRLDEVYAL YADPDADFDK LAAEQGRLEE IIQAHDGHNL 
0141 NVQLERAADA LRLPDWDAKI ANLSGGERRR VALCRLLLEK PDMLLLDEPT NHLDAESVAW LERFLHDFEG 
0211 TVVAITHDRY FLDNVAGWIL ELDRGEGIPW EGNYSSWLEQ KDQRLAQEAS QEAARRKSIE KELEWVRQGT 
0281 KGRQSKGKAR LARFEELNST EYQKRNETNE LFIPPGPRLG DKVLEVSNLR KSYGDRLLID DLSFSIPKGA 
0351 IVGIIGPNGA GKSTLFRMIS GQEQPDSGTI TLGETVKLAS VDQFRDSMDN SKTVWEEVSG GLDIMKIGNT 
0421 EMPSRAYVGR FNFKGVDQGK RVGELSGGER GRLHLAKLLQ VGGNMLLLDE PTNDLDIETL RALENALLEF 
0491 PGCAMVISHD RWFLDRIATH ILDYQDEGKV EFFEGNFTEY EEYKKRTLGA DALEPKRIKY KRIAK
    Nucleotide
    FASTA format

    View sequence out neighbor 100bp 
    -100                                             actgcgaggg tgatcgaccg gctgggatta 
-070 ggcggggaaa aaggctacac ttcgcctttg aaaactcatt atcacgataa acatagaggc gaagtccaac 
0001 gtggctcaat tcgtttatac catgcatcgt gtcggcaaag ttgttccgcc gaaacgtcat attttgaaaa 
0071 acatctctct gagtttcttc cctggggcaa aaattggtgt cctgggtctg aatggcgcgg gtaagtccac 
0141 cctgctgcgc attatggcgg gcattgataa agacatcgaa ggtgaagcgc gtccgcagcc agacatcaag 
0211 attggttatc tgccgcagga accgcagctg aacccggaac acaccgtgcg tgagtccatt gaagaagcgg 
0281 tttcagaagt ggttaacgcc ctgaaacgcc tggatgaagt gtatgcgctg tacgccgatc cggatgccga 
0351 ttttgacaag ctggccgctg aacaaggccg tctggaagag atcattcagg ctcacgacgg tcataatctg 
0421 aacgtacagc tggagcgtgc ggcggatgcg ctacgtctgc cggactggga cgcgaaaatc gctaacctct 
0491 ccggtggtga acgtcgtcgc gtagcgttgt gccgcctgct gctggaaaaa ccagacatgc tgctgctcga 
0561 cgaaccgacc aaccacctgg atgccgaatc cgtggcctgg ctggaacgct tcctgcacga cttcgaaggc 
0631 accgttgtgg cgattaccca cgaccgttac ttcctcgata acgttgcagg ctggatcctc gaacttgacc 
0701 gcggtgaagg tattccgtgg gaaggtaact actcctcctg gctggagcag aaagatcagc gcctggcgca 
0771 ggaagcttca caagaagcgg cgcgtcgtaa gtcgattgag aaagagctgg aatgggtacg tcaaggtact 
0841 aaaggccgtc agtcgaaagg taaagcacgt ctggcgcgct ttgaagaact gaacagcacc gaatatcaga 
0911 aacgtaacga aaccaacgaa ctgtttattc cacctggacc gcgtctgggc gataaagtgc tggaagtcag 
0981 caacctgcgt aaatcctatg gcgatcgtct gctgattgat gacctgagct tctcgatccc gaaaggagcg 
1051 atcgtcggga tcatcggtcc gaacggtgcg ggtaaatcga ccctgttccg tatgatctct ggtcaggaac 
1121 agccggacag cggcaccatc actttgggtg aaacggtgaa actggcgtcg gttgatcagt tccgtgactc 
1191 aatggataac agcaaaaccg tttgggaaga agtttccggc gggctggata tcatgaagat cggcaacacc 
1261 gagatgccaa gccgcgccta cgttggccgc tttaacttta aaggggttga tcagggtaaa cgcgttggtg 
1331 aactctccgg tggtgagcgc ggtcgtctgc atctggcgaa gctgctgcag gttggcggca acatgctgct 
1401 gctcgacgaa ccaaccaacg acctggatat cgaaaccctg cgcgcgctgg aaaacgccct gctggagttc 
1471 ccgggctgtg cgatggttat ctcgcacgac cgttggttcc tcgaccgtat cgccacgcac attctggatt 
1541 accaggatga aggtaaagtt gagttcttcg aaggtaactt taccgagtac gaagagtaca agaaacgcac 
1611 gctgggcgca gacgcgctgg agccgaagcg tatcaagtac aagcgtattg cgaagtaatg cgtaaaatgc 
1681 cggatgcggc gcgaacgcct tatccggcct acaaaaccag caatttcaat acgttgtaaa actgtaggcc 
1751 tgataagacg cggtaagc