|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
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|
References (PMID)
|
|
|
Deletion
|
OCR17
(D)
,
OCR17,18-1
(D)
,
OCR17-2
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ulaF
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
ulaF
Search strains by all related name:
ulaF b4198 ECK4194 JW4156 o228a sgaE yjfX
|
General information (Go to Linear View: )
|
|
Gene Name
|
ulaF
|
|
Alternative name
|
b4198,ECK4194,JW4156,o228a,sgaE,yjfX
|
|
Location, Length
|
4,421,723 - 4,422,409
(
+
)
;
95.30
min
;
687
(bp) ,
228
(aa)
|
|
Product
|
L-ribulose 5-phosphate 4-epimerase
|
|
Operon Name
|
ulaABCDEF
|
|
Note
|
putative epimerase/aldolase
|
|
Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0008270
;
zinc ion binding ( ulaF )
GO:0008742
;
L-ribulose-phosphate 4-epimerase activity ( ulaF )
GO:0016853
;
isomerase activity ( ulaF )
GO:0019852
;
L-ascorbic acid metabolic process ( ulaF )
GO:0046872
;
metal ion binding ( ulaF )
|
|
PID
|
1790642
|
EC number
(KEGG Pathway)
|
5.1.3.4
|
|
SWISS-PROT
(
Show simple
)
|
Entry name(Acc.no)
|
SGAE_ECOLI
(
P39306
)
|
|
- Protein name
|
Probable sugar isomerase sgaE
|
|
- Synonyms
|
EC 5.1.-.-
|
|
- Gene name
|
Name=sgaE; OrderedLocusNames=b4198;
|
|
- Comments
|
FUNCTION:Probable pentulose-5-phosphate-4-epimerase. Probably involved in a metabolic pathway with sgaH and sgaU.
COFACTOR:Binds 1 zinc ion per subunit (Potential).
SIMILARITY:Belongs to the aldolase class II family. AraD/fucA subfamily.
|
|
Entry name(Acc.no)
|
Q8FAI6
(
Q8FAI6
)
|
|
- Protein name
|
Probable sugar isomerase sgaE
|
|
- Synonyms
|
EC 5.1.-.-
|
|
- Gene name
|
Name=sgaE; OrderedLocusNames=c5288;
|
|
- Comments
|
SUBCELLULAR LOCATION:Integral membrane protein (By similarity).
|
|
Entry name(Acc.no)
|
Q8XDI4
(
Q8XDI4
)
|
|
- Protein name
|
Putative epimerase/aldolase.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=sgaE; OrderedLocusNames=z5807;
|
|
- Comments
|
SIMILARITY:Contains 1 HTH gntR-type DNA-binding domain.
|
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ulaF
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of L-Ribulose-5-Phosphate 4-Epimerase
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
L-ribulose-5-phosphate 4-epimerase ulaF
|
|
PSI-BLAST
|
L-ribulose-5-phosphate 4-epimerase ulaF
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
L-ribulose 5-phosphate 4-epimerase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
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Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MQKLKQQVFE ANMELPRYGL VTFTWGNVSA IDRERGLVVI KPSGVAYETM KAADMVVVDM SGKVVEGEYR
0071 PSSDTATHLE LYRRYPSLGG IVHTHSTHAT AWAQAGLAIP ALGTTHADYF FGDIPCTRGL SEEEVQGEYE
0141 LNTGKVIIET LGNAEPLHTP GIVVYQHGPF AWGKDAHDAV HNAVVMEEVA KMAWIARGIN PQLNHIDSFL
0211 MNKHFMRKHG PNAYYGQK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGTGGAGCGA AACGGCGGAA GACCCGGCGG
-070 CAGAAGTGGC GAAAGCGCGT GATTGGGTGA AAGCGCGCAT GGCGAAAGCG GGCATGGTGG AGGCGGCATA
0001 atgcaaaagc taaaacagca ggtatttgaa gccaacatgg agctgccgcg ctacgggctg gtgaccttta
0071 cctggggcaa cgtcagcgct atcgaccgcg aacgcgggct ggtggtgatc aagcccagcg gcgttgccta
0141 cgaaaccatg aaagcggccg atatggtggt ggttgatatg agcggcaagg tggtggaagg ggagtatcgc
0211 ccatcttccg acactgcgac gcatctcgaa ctctaccgtc gttacccgtc gcttggtggc attgtccata
0281 cccactccac tcatgccacc gcatgggcgc aggcggggct ggcgatcccg gcgttaggca ccacgcacgc
0351 cgactacttc tttggcgaca ttccgtgtac gcgcgggtta agcgaagaag aggtgcaggg cgagtatgaa
0421 ctgaacaccg gcaaagtgat tatcgaaacg ctgggcaacg ccgagccgct gcatacgccg ggaattgtgg
0491 tgtatcagca cgggccgttc gcctggggga aagatgctca cgatgcggtg cataacgcgg tggtgatgga
0561 agaagtggcg aaaatggcgt ggattgcccg cggcattaac ccacaactca atcacatcga cagcttcctg
0631 atgaataaac acttcatgcg taaacacggt cctaacgctt attacgggca gaagtagAAC ACGCGCTGCG
0701 GAAATTTCCT TCCTCGGGAG ATAACTGGTC TAATTCCGCA GCCGTTTTTC AAAAAAAAGC CCCCTGCGAA
0771 GGGGGCAAAG CAAACTA
|
