|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL25,26-1
(D)
,
OCL26
(D)
,
OCL26-1
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
aaeB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
aaeB
Search strains by all related name:
aaeB b3240 ECK3229 f655 JW3209 yhcP
|
General information (Go to Linear View: )
|
|
Gene Name
|
aaeB
|
|
Alternative name
|
b3240,ECK3229,f655,JW3209,yhcP
|
|
Location, Length
|
3,384,243 - 3,386,210
(
-
)
;
72.94
min
;
1968
(bp) ,
655
(aa)
|
|
Product
|
p-hydroxybenzoic acid efflux system component
|
|
Operon Name
|
aaeXAB
|
|
Note
|
GO_component: GO:0009274 - peptidoglycan-based cell wall
|
|
Function
|
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( aaeB )
GO:0006810
;
transport ( aaeB )
GO:0016020
;
membrane ( aaeB )
GO:0016021
;
integral to membrane ( aaeB )
|
|
PID
|
1789636
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show simple
)
|
Entry name(Acc.no)
|
YHCP_ECOLI
(
P46481
)
|
|
- Protein name
|
Hypothetical protein yhcP.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yhcP; OrderedLocusNames=b3240;
|
|
- Comments
|
SUBCELLULAR LOCATION:Integral membrane protein (Potential).
SIMILARITY:Some, to B.cepacia fusC.
|
|
Entry name(Acc.no)
|
Q8FD51
(
Q8FD51
)
|
|
- Protein name
|
Hypothetical protein yhcP.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yhcP; OrderedLocusNames=c3995;
|
|
- Comments
|
SIMILARITY:Belongs to the ABC transporter family.
|
|
Entry name(Acc.no)
|
Q8X9E6
(
Q8X9E6
)
|
|
- Protein name
|
Hypothetical protein yhcP.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yhcP; OrderedLocusNames=z4599;
|
|
- Comments
|
SIMILARITY:Belongs to the ompA family.
|
| Sequences |
Amino acid
FASTA format
|
0001 MGIFSIANQH IRFAVKLATA IVLALFVGFH FQLETPRWAV LTAAIVAAGT AFAAGGEPYS GAIRYRGFLR
0071 IIGTFIGCIA GLVIIIAMIR APLLMILVCC IWAGFCTWIS SLVRIENSYA WGLAGYTALI IVITIQPEPL
0141 LTPQFAVERC SEIVIGIVCA IMADLLFSPR SIKQEVDREL ESLLVAQYQL MQLCIKHGDG EVVDKAWGDL
0211 VRRTTALQGM RSNLNMESSR WARANRRLKA INTLSLTLIT QSCETYLIQN TRPELITDTF REFFDTPVET
0281 AQDVHKQLKR LRRVIAWTGE RETPVTIYSW VAAATRYQLL KRGVISNTKI NATEEEILQG EPEVKVESAE
0351 RHHAMVNFWR TTLSCILGTL FWLWTGWTSG SGAMVMIAVV TSLAMRLPNP RMVAIDFIYG TLAALPLGLL
0421 YFLVIIPNTQ QSMLLLCISL AVLGFFLGIE VQKRRLGSMG ALASTINIIV LDNPMTFHFS QFLDSALGQI
0491 VGCVLAFTVI LLVRDKSRDR TGRVLLNQFV SAAVSAMTTN VARRKENHLP ALYQQLFLLM NKFPGDLPKF
0561 RLALTMIIAH QRLRDAPIPV NEDLSAFHRQ MRRTADHVIS ARSDDKRRRY FGQLLEELEI YQEKLRIWQA
0631 PPQVTEPVNR LAGMLHKYQH ALTDS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ctgctacagt ggtggtcact ggcaaacaag
-070 atcgcgacga aagccaggat tcgttcttcc gtaaaatggc ccatcgcctg cgtgagtttg gttaatcacg
0001 atgggtattt tctccattgc taaccaacat attcgctttg cggtaaaact ggcgaccgcc attgtactgg
0071 cgctgtttgt tggctttcac ttccagctgg aaacgccacg ctgggcggta ctgacagcgg cgattgttgc
0141 cgccggtacg gcctttgctg cgggaggtga accgtattct ggcgctattc gctatcgtgg ctttttgcgc
0211 atcatcggca catttattgg ctgtattgcc ggactggtga tcatcattgc gatgatccgc gcaccattat
0281 tgatgattct ggtgtgctgt atctgggccg gtttttgtac ctggatatcc tcgctggtac gaatagaaaa
0351 ctcgtatgcg tgggggctgg ccggttatac cgcgctgatc attgtgatca ccattcagcc ggaaccattg
0421 cttacgccgc agtttgccgt cgaacgttgt agcgagatcg ttatcggtat tgtgtgtgcg attatggcgg
0491 atttgctctt ttctccgcga tcgatcaaac aagaagtgga tcgagagctg gaaagtttgc tggtcgcgca
0561 atatcaatta atgcaactct gtatcaagca tggcgatggt gaagttgtcg ataaagcctg gggcgacctg
0631 gtgcgacgca ccacggcgct acaaggcatg cgcagcaacc tgaatatgga atcttcccgc tgggcgcggg
0701 ccaatcgacg tttaaaagcg atcaatacgc tatcgctgac gctgattacc caatcctgcg aaacttatct
0771 tattcagaat acgcgcccgg aattgatcac tgatactttc cgcgaatttt ttgacacgcc ggtagaaacc
0841 gcgcaggacg tccacaagca gctcaaacgc ctgcggagag ttatcgcctg gaccggggaa cgggaaacgc
0911 ctgtcaccat ttatagctgg gtcgcggcgg caacgcgtta tcagcttctc aagcgcggcg ttatcagtaa
0981 cacaaaaatc aacgccaccg aagaagagat cctgcaaggc gaaccggaag taaaagtaga gtcagccgaa
1051 cgtcatcatg caatggttaa cttctggcga accacacttt cctgcattct gggcacgctt ttctggctgt
1121 ggacgggctg gacttccggc agtggtgcaa tggtgatgat tgcggtagtg acgtcactgg caatgcgttt
1191 gccgaatcca cgcatggtgg cgatcgactt tatctacggg acgctggccg cgctgccgtt agggctgctc
1261 tactttttgg tgattatccc taatacccaa cagagcatgt tgctgctgtg cattagcctg gcagtgctgg
1331 gattcttcct cggtatagaa gtacagaaac ggcgactggg ctcgatgggg gcactggcca gcaccataaa
1401 tattatcgtg ctggataacc cgatgacttt ccatttcagt cagtttctcg acagcgcatt agggcaaatc
1471 gtcggctgtg tgctcgcgtt caccgttatt ttgctggtgc gggataaatc gcgcgacagg accggacgtg
1541 tactgcttaa tcagtttgtt tctgccgctg tttccgcgat gactaccaat gtggcacgtc gtaaagagaa
1611 ccacctcccg gcactttatc agcagctgtt tttgctgatg aataagttcc caggggattt gccgaaattt
1681 cgcctggcgc tgacgatgat tatcgcgcac cagcgcctgc gtgatgcacc gatcccggtt aacgaggatt
1751 tatcggcgtt tcaccgacaa atgcgccgca cagcagacca tgtgatatct gcccgtagcg atgataaacg
1821 tcgtcggtac tttggccagt tgctggaaga actggaaatc taccaggaaa agctacgcat ctggcaagcg
1891 ccaccgcagg tgacggaacc ggtaaatcgg ctggcgggga tgctccataa gtatcaacat gcgttgaccg
1961 atagttaagt caaaaccgac gccaaaagcg tcggtttttt catggctata cttagcgatg cacggcagaa
2031 ctcgccgcga aacgtgacgg tggcaacaga tgaatatt
|
