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PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Microbiol Mol Biol Rev. 1998;62(3):814-984
Linkage map of Escherichia coli K-12, edition 10: the traditional map.
Berlyn MK.
(
9729611
)
|
|
|
Deletion
|
LD3-5-1
(LD)
,
OCL77
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
fliE
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
fliE
Search strains by all related name:
fliE b1937 ECK1935 flaAI flaN JW1921
|
General information (Go to Linear View: )
|
|
Gene Name
|
fliE
|
|
Alternative name
|
b1937,ECK1935,flaAI,flaN,JW1921
|
|
Location, Length
|
2,010,724 - 2,011,038
(
-
)
;
43.34
min
;
315
(bp) ,
104
(aa)
|
|
Product
|
flagellar basal-body component
|
|
Operon Name
|
fliE
|
|
Note
|
flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junction; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis
|
|
Function
|
structural component; Surface structures
|
|
Gene Ontology
|
GO:0001539
;
ciliary or flagellar motility ( fliE )
GO:0003774
;
motor activity ( fliE )
GO:0005198
;
structural molecule activity ( fliE )
GO:0009288
;
flagellin-based flagellum ( fliE )
|
|
PID
|
1788247
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show simple
)
|
Entry name(Acc.no)
|
FLIN_ECOLI
(
P15070
)
|
|
- Protein name
|
Flagellar motor switch protein fliN.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=fliN; Synonyms=motD, flaN; OrderedLocusNames=b1946;
|
|
- Comments
|
FUNCTION:FliN is one of three proteins (fliG, fliN, fliM) that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with the cheY and cheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
SUBCELLULAR LOCATION:Inner membrane-associated.
SIMILARITY:Belongs to the fliN/mopA/spaO family.
|
|
Entry name(Acc.no)
|
FLIE_ECOLI
(
P25797
)
|
|
- Protein name
|
Flagellar hook-basal body complex protein fliE.
|
|
- Synonyms
|
|
|
- Gene name
|
OrderedLocusNames=b1937, z3027, ECs2676;
|
|
- Comments
|
SIMILARITY:Belongs to the fliE family.
|
|
Entry name(Acc.no)
|
FLIE_ECOL6
(
Q8FGL1
)
|
|
- Protein name
|
Flagellar hook-basal body complex protein fliE.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=fliE; OrderedLocusNames=c2353;
|
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- Comments
|
SIMILARITY:Belongs to the fliE family.
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
fliE
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Flagellar hook-basal body complex protein fliE
|
|
PSI-BLAST
|
Flagellar hook-basal body complex protein fliE
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
flagellar basal body protein [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
|
MMBR References
|
Annu Rev Genet. 1992;26:131-58.
Genetics and biogenesis of bacterial flagella.
Macnab RM.
(
1482109
)
|
J Bacteriol. 1992;174:2298-2304
Characterization of the fliE genes of Escherichia coli and Salmonella typhimurium and identification of the fliE protein as a component of the flagellar hook-basal body complex.
Muller, V., C. J. Jones, I. Kawagishi, S. Aizawa, and R. M. Macnab.
|
| Sequences |
Amino acid
FASTA format
|
0001 MSAIQGIEGV ISQLQATAMS ARAQESLPQP TISFAGQLHA ALDRISDTQT AARTQAEKFT LGEPGVALND
0071 VMTDMQKASV SMQMGIQVRN KLVAAYQEVM SMQV
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tctatccgcc aataaacccg tttttttgtt
-070 gctatttagc gcctttgtct tattgactta ctggtaggct ttgctaccag aaattatccg ggagacgaga
0001 atgtcagcga tacaggggat tgaaggggtt atcagccagt tacaggctac ggcgatgagt gcgcgtgcgc
0071 aggaatcact gccgcaaccg accattagtt ttgccgggca gctgcacgcc gcgctcgatc gcattagtga
0141 tacacaaaca gctgcccgca cgcaggcaga aaaattcact ctcggtgaac ccggcgtggc gttaaacgat
0211 gtgatgaccg atatgcaaaa agcctcagtt tctatgcaaa tggggattca ggtgcgtaat aagctggtgg
0281 cggcgtatca ggaagtgatg agcatgcagg tgtaggtttt gtaacctgtt gttaattaca tccgatctca
0351 ccgcgtgggg catggatggg gcaaactcac tcaatttctg gtttaaaatg gatacctgat cctga
|
