|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
hicA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
hicA
Search strains by all related name:
hicA b1437 b4532 ECK1431 f65 JW5230 yncN
|
General information (Go to Linear View: )
|
|
Gene Name
|
hicA
|
|
Alternative name
|
b1437,b4532,ECK1431,f65,JW5230,yncN
|
|
Location, Length
|
1,507,310 - 1,507,486
(
+
)
;
32.49
min
;
177
(bp) ,
58
(aa)
|
|
Product
|
mRNA interferase toxin of the HicAB toxin-antitoxin system
|
|
Operon Name
|
hicAB
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
87081911
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show simple
)
|
Entry name(Acc.no)
|
P76106
(
P76106
)
|
|
- Protein name
|
Hypothetical protein.
|
|
- Synonyms
|
|
|
- Gene name
|
OrderedLocusNames=b1437;
|
|
- Comments
|
SIMILARITY:Belongs to the yafZ/yfjQ/yubP family.
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yncN
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Putative uncharacterized protein yncN
|
|
PSI-BLAST
|
Putative uncharacterized protein yncN
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein [Escherichia coli W3110]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
|
| Sequences |
Amino acid
FASTA format
|
0001 MKQSEFRRWL ESQGVDVANG SNHLKLRFHG RRSVMPRHPC DEIKEPLRKA ILKQLGLS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TCTGCCGTTG CGGCGATTTA GTGCTATTTT
-070 CGAGCAAATT ACACACGGAG GTAAACACTA ATGTTTACTT TGTTGATATA CTCAGCGGCA GGGAGGCGAT
0001 gtgaaacaaa gcgagttcag acgttggctc gaatctcagg gcgtcgatgt agcgaatggc agcaaccatt
0071 tgaaactcag gtttcatggg aggcgcagtg tcatgccgcg tcacccctgc gatgagatta aagaaccatt
0141 gcgtaaagca atcctgaaac aactcggttt gagttaaTCG CCAATTAAAA AGGTTAATGA CATGCGAGAG
0211 ACAGTCGAAA TTATGCGTTA TCCCGTCACT CTTACACCCG CGCCGGAAGG CGGTTATATG GTTTCTT
|
