MG1655
W3110
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Gene Report : ralR
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion 20 (LD)  ,  DE(PLK1608)  ,  OCR70,L90-5 (LD 20-1_P/O) (D)  ,  OCR70,L90-6 (LD 20-1_P/O & 20-2TC) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  ralR
Related strains
     Strains Search Search strains by gene name:  ralR   Search strains by all related name:  ralR b1348 ECK1345 JW5208 lar ral ydaB

General information  (Go to Linear View:)
 Gene Name ralR  
 Alternative name b1348,ECK1345,JW5208,lar,ral,ydaB  
 Location, Length 1,411,757 - 1,411,951 (  -  ) ;   30.43 min ; 195 (bp) ,   64 (aa) Go to Linear View
 Product Rac prophage; restriction alleviation protein  
 Operon Name recET-lar-ydaCQ-intR  
 Note restriction alleviation and modification enhancement  
 Function enzyme; Phage or Prophage Related  
 Gene Ontology GO:0009307; DNA restriction-modification system ( lar )
 PID 1787610  
 EC number
  (KEGG Pathway)
 
 
SWISS-PROT  ( Show simple )
  botton Entry name(Acc.no) LAR_ECOLI ( P33229 )
    -  Protein name Restriction alleviation and modification enhancement protein.  
    -  Synonyms  
    -  Gene name Name=lar; OrderedLocusNames=b1348;  
    -  Comments
  • FUNCTION:Has a RAL-like activity.
  • SIMILARITY:Some, to lambda, P22, and phi-21 RAL.  
  •   botton Entry name(Acc.no) Q8X8Q9 ( Q8X8Q9 )
        -  Protein name Restriction alleviation and modification enhancement protein encoded by prophage CP-933R.  
        -  Synonyms  
        -  Gene name Name=lar; OrderedLocusNames=z2412;  
        -  Comments
  • SIMILARITY:Belongs to the DEAD box helicase family.  

  •  Linear View (Whole Mode)
    View Location
       1400.0  –  1425.0 (KBP)

    Homology Analysis
    BLAST
        Bacteria
             GTOP lar (  homologous genes of other bacterias  )  
        PDB     (database updated : 2007.02.20 )
            PSI-BLAST  
        SWISS-PROT     (database updated : 2007.02.20 )
             BLAST Restriction alleviation and modification enhancement protein  
             PSI-BLAST Restriction alleviation and modification enhancement protein
        nr     (database updated : 2007.02.20 )
             BLAST putative  
    Pfam 28.0   (database updated : 2015-05 )
        Pfam
    PROSITE
        PROSITE CAMP_PHOSPHO_SITE    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    MYRISTYL     

    Other Cross-Reference
        EcoCyc ralR 

    MMBR References
    Mol Microbiol. 1995;16(4):769-77.
    Restriction alleviation and modification enhancement by the Rac prophage of Escherichia coli K-12.
    King G, Murray NE. ( 7476171 )
    J Virol. 1981;38(2):621-31.
    Restriction alleviation by bacteriophages lambda and lambda reverse.
    Toothman P. ( 6264133 )

    Sequences
    Amino acid
    FASTA format
    0001 MRYDNVKPCP FCGCPSVTVK AISGYYRAKC NGCESRTGYG GSEKEALERW NKRTTGNNNG GVHV
    
    
    Nucleotide
    FASTA format

    View sequence out neighbor 100bp
    -100                                             tattaaccgg ggaatacagt gtaatcgata 
    -070 attcagagga ataattcagc ctggcggtgt aatgcaccgc caacttgaaa tattttttat gagaaaaatt 
    0001 atgagatatg acaatgttaa accatgtcca ttttgtggtt gtccatcagt aacggtgaaa gccatttcag 
    0071 gatattaccg agcgaagtgt aacggatgcg aatcccgaac cggttatggt ggaagtgaaa aagaagcact 
    0141 cgaaagatgg aataaacgaa ccactggaaa taataatgga ggtgttcatg tataaaatta ccgccactat 
    0211 tgaaaaggaa ggtggcactc ctactaactg gacaagatat tcaaaatcta aactaacgaa atcagaatgc 
    0281 gaaaaaatgc tctca