|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ydaQ
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ydaQ
Search strains by all related name:
ydaQ b1346 ECK1343 f79 JW5207
|
General information (Go to Linear View: )
|
|
Gene Name
|
ydaQ
|
|
Alternative name
|
b1346,ECK1343,f79,JW5207
|
|
Location, Length
|
1,411,261 - 1,411,476
(
-
)
;
30.42
min
;
216
(bp) ,
71
(aa)
|
|
Product
|
Rac prophage; conserved protein
|
|
Operon Name
|
recET-lar-ydaCQ-intR
|
|
Note
|
putative lambdoid prophage Rac excisionase
|
|
Function
|
Phage or Prophage Related
|
|
Gene Ontology
|
|
|
PID
|
87081882
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show simple
)
|
Entry name(Acc.no)
|
YDAQ_ECOLI
(
P76057
)
|
|
- Protein name
|
Hypothetical protein ydaQ.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ydaQ; OrderedLocusNames=b1346;
|
|
- Comments
|
SIMILARITY:Strong, to H.influenzae HI1371.1.
|
|
Entry name(Acc.no)
|
Q8X8Q7
(
Q8X8Q7
)
|
|
- Protein name
|
Hypothetical protein ydaQ.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ydaQ; OrderedLocusNames=z2414;
|
|
- Comments
|
SIMILARITY:Belongs to the DEAD box helicase family.
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ydaQ
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein ydaQ
|
|
PSI-BLAST
|
Hypothetical protein ydaQ
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein ECs1930 [Escherichia coli O157:H7 str. Sakai]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
RGD
|
| Sequences |
Amino acid
FASTA format
|
0001 MAQVIFNEEW MVEYGLMLRT GLGARQIEAY RQNCWVEGFH FKRVSPLGKP DSKRGIIWYN YPKINQFIKD
0071 S
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 aattgcattg tattcaaatt aaaacttcat
-070 agctgattat taataatcaa catcgggcgt caatttcagt ctaacattgg cgcctgccag aggtgatgcg
0001 atggcacaag taatctttaa tgaagagtgg atggttgaat acggcctgat gcttcgcact ggtctggggg
0071 ccagacaaat tgaagcatac cgccagaact gttgggtgga gggcttccac ttcaaacgag tatctccttt
0141 aggtaagcca gacagcaaac gagggattat ctggtacaac tatccaaaga taaatcagtt tatcaaagac
0211 tcatgatatg tctaaattac caacaggtgt cgagattaga ggtagataca ttcgcatctg gttcatgttt
0281 cgaggaaaac gatgtcggga aacattaaaa ggctgg
|
