|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ralR
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ralR
Search strains by all related name:
ralR b1348 ECK1345 JW5208 lar ral ydaB
|
General information (Go to Linear View: )
|
|
Gene Name
|
ralR
|
|
Alternative name
|
b1348,ECK1345,JW5208,lar,ral,ydaB
|
|
Location, Length
|
1,411,757 - 1,411,951
(
-
)
;
30.43
min
;
195
(bp) ,
64
(aa)
|
|
Product
|
Rac prophage; restriction alleviation protein
|
|
Operon Name
|
recET-lar-ydaCQ-intR
|
|
Note
|
restriction alleviation and modification enhancement
|
|
Function
|
enzyme; Phage or Prophage Related
|
|
Gene Ontology
|
GO:0009307
;
DNA restriction-modification system ( lar )
|
|
PID
|
1787610
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show simple
)
|
Entry name(Acc.no)
|
LAR_ECOLI
(
P33229
)
|
|
- Protein name
|
Restriction alleviation and modification enhancement protein.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=lar; OrderedLocusNames=b1348;
|
|
- Comments
|
FUNCTION:Has a RAL-like activity.
SIMILARITY:Some, to lambda, P22, and phi-21 RAL.
|
|
Entry name(Acc.no)
|
Q8X8Q9
(
Q8X8Q9
)
|
|
- Protein name
|
Restriction alleviation and modification enhancement protein encoded by prophage CP-933R.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=lar; OrderedLocusNames=z2412;
|
|
- Comments
|
SIMILARITY:Belongs to the DEAD box helicase family.
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
lar
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Restriction alleviation and modification enhancement protein
|
|
PSI-BLAST
|
Restriction alleviation and modification enhancement protein
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
putative
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
|
MMBR References
|
Mol Microbiol. 1995;16(4):769-77.
Restriction alleviation and modification enhancement by the Rac prophage of Escherichia coli K-12.
King G, Murray NE.
(
7476171
)
|
J Virol. 1981;38(2):621-31.
Restriction alleviation by bacteriophages lambda and lambda reverse.
Toothman P.
(
6264133
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MRYDNVKPCP FCGCPSVTVK AISGYYRAKC NGCESRTGYG GSEKEALERW NKRTTGNNNG GVHV
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tattaaccgg ggaatacagt gtaatcgata
-070 attcagagga ataattcagc ctggcggtgt aatgcaccgc caacttgaaa tattttttat gagaaaaatt
0001 atgagatatg acaatgttaa accatgtcca ttttgtggtt gtccatcagt aacggtgaaa gccatttcag
0071 gatattaccg agcgaagtgt aacggatgcg aatcccgaac cggttatggt ggaagtgaaa aagaagcact
0141 cgaaagatgg aataaacgaa ccactggaaa taataatgga ggtgttcatg tataaaatta ccgccactat
0211 tgaaaaggaa ggtggcactc ctactaactg gacaagatat tcaaaatcta aactaacgaa atcagaatgc
0281 gaaaaaatgc tctca
|
