|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR33,34-1
(D)
,
OCR33,34-2
(D)
,
OCR33,35-4 (AK4-2 / BK5-2)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
tff
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
tff
Search strains by all related name:
tff b4414 ECK0167 JWR0225 t44
|
General information (Go to Linear View: )
|
|
misc_RNA Name
|
tff
|
|
Alternative name
|
b4414,ECK0167,JWR0225,t44
|
|
Location, Length
|
189,712 - 189,847
(
+
)
;
4.09
min
;
136
(bp) ,
|
|
Product
|
novel sRNA, function unknown
|
|
Operon Name
|
tff-rpsB-tsf
|
|
Note
|
identified in a large scale screen
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Nucleotide
FASTA format
View sequence in neighbor 100bp
|
0001 cggacttccg atccatttcg tatacacaga ctggacggaa gcgacaatct cactttgtgt aacaacacac
0071 acgtatcggc acatattccg gggtgccctt tggggtcggt aatatgggat acgtggaggc ataacc
|
