|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL48,49-4 (BK6-8 / AK4-8)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
serV
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
serV
Search strains by all related name:
serV b2695 ECK2690 JWR0061 supD
|
General information (Go to Linear View: )
|
|
tRNA Name
|
serV
|
|
Alternative name
|
b2695,ECK2690,JWR0061,supD
|
|
Location, Length
|
2,816,575 - 2,816,667
(
-
)
;
60.71
min
;
93
(bp) ,
|
|
Product
|
tRNA-Ser
|
|
Operon Name
|
serV-argVYZQ
|
|
Note
|
anticodon: GCU
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
|
MMBR References
|
Microbiol. Rev. 1988;52:354-374.
Transfer ribonucleic acid-mediated suppression of termination codons in Escherichia coli.
Eggertsson, G., and D. Soll.
|
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H.
(
2184240
)
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gaaaaattgt ttgacttata agtctcagaa
-070 agtaatatgt gcgccacgca gcgacgatga gcgataaaca agttcttcga agcactcgta agaggcgtgt
0001 ggtgaggtgg ccgagaggct gaaggcgctc ccctgctaag ggagtatgcg gtcaaaagct gcatccgggg
0071 ttcgaatccc cgcctcaccg ccatttgcat ccgtagctca gctggataga gtactcggct acgaaccgag
0141 cggtcggagg ttcgaatcct cccggatgca ccatattcta cgtactttca gcg
|
