PEC Original Annotations
|
Essentiality
|
Class
|
non-essential
|
References (PMID)
|
J Bacteriol. 1981;148(2):472-9.
L-arabinose transport systems in Escherichia coli K-12.
Kolodrubetz D, Schleif R.
(
7028715
)
|
|
Deletion
|
OCL44
(D)
|
Related gene (W3110 PEC)
|
Gene Search
|
Search MG1655 PEC by gene name:
araE
|
Related strains
|
Strains Search
|
Search strains by gene name:
araE
Search strains by all related name:
araE b2841 ECK2839 JW2809
|
General information (Go to Linear View:)
|
Gene Name
|
araE
|
Alternative name
|
b2841,ECK2839,JW2809
|
Location, Length
|
2,978,786 - 2,980,204
(
-
)
;
64.20
min
;
1419
(bp) ,
472
(aa)
|
Product
|
arabinose transporter
|
Operon Name
|
araE
|
Note
|
low-affinity L-arabinose transport system proton symport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015524 -L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity; GO_process: GO:0016052 - carbohydrate catabolic process
|
Function
|
transport; Transport of small molecules: Carbohydrates, organic acids, alcohols
|
Gene Ontology
|
GO:0005215
;
transporter activity ( araE )
GO:0005351
;
sugar:hydrogen ion symporter activity ( araE )
GO:0005886
;
plasma membrane ( araE )
GO:0006810
;
transport ( araE )
GO:0008643
;
carbohydrate transport ( araE )
GO:0015293
;
symporter activity ( araE )
GO:0016020
;
membrane ( araE )
GO:0016021
;
integral to membrane ( araE )
|
PID
|
1789207
|
EC number
(KEGG Pathway)
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
ARAE_ECOLI
(
P09830
;
Q46937
)
|
- Protein name
|
Arabinose-proton symporter
|
- Synonyms
|
Arabinose transporter
|
- Gene name
|
Name=araE; OrderedLocusNames=b2841, z4161, ECs3698;
|
MMBR References
|
J Bacteriol. 1981;148(2):472-9.
L-arabinose transport systems in Escherichia coli K-12.
Kolodrubetz D, Schleif R.
(
7028715
)
|
J Mol Biol. 1981;151(2):215-27.
Regulation of the L-arabinose transport operons in Escherichia coli.
Kolodrubetz D, Schleif R.
(
6461771
)
|
Biochem J. 1981;196(1):269-83.
Identification of the AraE transport protein of Escherichia coli.
MacPherson AJ, Jones-Mortimer MC, Henderson PJ.
(
7030324
)
|
J Biol Chem. 1988;263:8003-8010
The cloning, DNA sequence, and overexpression of the gene araE coding for arabinose-proton symport in Escherichia coli K12.
Maiden, M. C. J., M. C. Jones-Mortimer, and P. J. F. Henderson.
|
J Mol Biol. 1983;171(4):369-81.
The araE low affinity L-arabinose transport promoter. Cloning, sequence, transcription start site and DNA binding sites of regulatory proteins.
Stoner C, Schleif R.
(
6319708
)
|
Sequences |
Amino acid
FASTA format
|
0001 MVTINTESAL TPRSLRDTRR MNMFVSVAAA VAGLLFGLDI GVIAGALPFI TDHFVLTSRL QEWVVSSMML
0071 GAAIGALFNG WLSFRLGRKY SLMAGAILFV LGSIGSAFAT SVEMLIAARV VLGIAVGIAS YTAPLYLSEM
0141 ASENVRGKMI SMYQLMVTLG IVLAFLSDTA FSYSGNWRAM LGVLALPAVL LIILVVFLPN SPRWLAEKGR
0211 HIEAEEVLRM LRDTSEKARE ELNEIRESLK LKQGGWALFK INRNVRRAVF LGMLLQAMQQ FTGMNIIMYY
0281 APRIFKMAGF TTTEQQMIAT LVVGLTFMFA TFIAVFTVDK AGRKPALKIG FSVMALGTLV LGYCLMQFDN
0351 GTASSGLSWL SVGMTMMCIA GYAMSAAPVV WILCSEIQPL KCRDFGITCS TTTNWVSNMI IGATFLTLLD
0421 SIGAAGTFWL YTALNIAFVG ITFWLIPETK NVTLEHIERK LMAGEKLRNI GV
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gcagcaattt aatccatatt tatgctgttt
-070 ccgacctgac acctgcgtga gttgttcacg tattttttca ctatgtctta ctctctgctg gcaggaaaaa
0001 atggttacta tcaatacgga atctgcttta acgccacgtt ctttgcggga tacgcggcgt atgaatatgt
0071 ttgtttcggt agctgctgcg gtcgcaggat tgttatttgg tcttgatatc ggcgtaatcg ccggagcgtt
0141 gccgttcatt accgatcact ttgtgctgac cagtcgtttg caggaatggg tggttagtag catgatgctc
0211 ggtgcagcaa ttggtgcgct gtttaatggt tggctgtcgt tccgcctggg gcgtaaatac agcctgatgg
0281 cgggggccat cctgtttgta ctcggttcta tagggtccgc ttttgcgacc agcgtagaga tgttaatcgc
0351 cgctcgtgtg gtgctgggca ttgctgtcgg gatcgcgtct tacaccgctc ctctgtatct ttctgaaatg
0421 gcaagtgaaa acgttcgcgg taagatgatc agtatgtacc agttgatggt cacactcggc atcgtgctgg
0491 cgtttttatc cgatacagcg ttcagttata gcggtaactg gcgcgcaatg ttgggggttc ttgctttacc
0561 agcagttctg ctgattattc tggtagtctt cctgccaaat agcccgcgct ggctggcgga aaaggggcgt
0631 catattgagg cggaagaagt attgcgtatg ctgcgcgata cgtcggaaaa agcgcgagaa gaactcaacg
0701 aaattcgtga aagcctgaag ttaaaacagg gcggttgggc actgtttaag atcaaccgta acgtccgtcg
0771 tgctgtgttt ctcggtatgt tgttgcaggc gatgcagcag tttaccggta tgaacatcat catgtactac
0841 gcgccgcgta tcttcaaaat ggcgggcttt acgaccacag aacaacagat gattgcgact ctggtcgtag
0911 ggctgacctt tatgttcgcc acctttattg cggtgtttac ggtagataaa gcagggcgta aaccggctct
0981 gaaaattggt ttcagcgtga tggcgttagg cactctggtg ctgggctatt gcctgatgca gtttgataac
1051 ggtacggctt ccagtggctt gtcctggctc tctgttggca tgacgatgat gtgtattgcc ggttatgcga
1121 tgagcgccgc gccagtggtg tggatcctgt gctctgaaat tcagccgctg aaatgccgcg atttcggtat
1191 tacctgttcg accaccacga actgggtgtc gaatatgatt atcggcgcga ccttcctgac actgcttgat
1261 agcattggcg ctgccggtac gttctggctc tacactgcgc tgaacattgc gtttgtgggc attactttct
1331 ggctcattcc ggaaaccaaa aatgtcacgc tggaacatat cgaacgcaaa ctgatggcag gcgagaagtt
1401 gagaaatatc ggcgtctgat ttcacgggcc ggatgtgctg tacatccggc ccttttttcg ttaatagaga
1471 ttgggcactt ggccgttgag gcgtttgtct cgttccttat tcagccttg
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