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PEC Original Annotations
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Essentiality
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Class
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non-essential
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|
References (PMID)
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Deletion
|
DE(araA-leu)7697
,
OCR30
(D)
|
|
Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
thiP
|
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Related strains
|
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Strains Search
|
Search strains by gene name:
thiP
Search strains by all related name:
thiP b0067 ECK0068 JW0066 sfuB yabK
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General information (Go to Linear View: )
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Gene Name
|
thiP
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Alternative name
|
b0067,ECK0068,JW0066,sfuB,yabK
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Location, Length
|
72,911 - 74,521
(
-
)
;
1.57
min
;
1611
(bp) ,
536
(aa)
|
|
Product
|
fused thiamin transporter subunits of ABC superfamily: membrane components
|
|
Operon Name
|
sgrR-sroA-tbpA-thiPQ
|
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Note
|
GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009228 - thiamin biosynthetic process
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Function
|
|
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Gene Ontology
|
GO:0005215
;
transporter activity ( thiP )
GO:0005886
;
plasma membrane ( thiP )
GO:0006810
;
transport ( thiP )
GO:0009276
;
1-2nm peptidoglycan-based cell wall ( thiP )
GO:0016020
;
membrane ( thiP )
GO:0016021
;
integral to membrane ( thiP )
|
|
PID
|
1786254
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
THIP_ECOLI
(
P31549
;
P75636
)
|
|
- Protein name
|
Thiamine transport system permease protein thiP.
|
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- Synonyms
|
|
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- Gene name
|
Name=thiP; OrderedLocusNames=b0067;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
thiP
(
homologous genes of other bacterias
)
|
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PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Thiamine transport system permease protein thiP
|
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PSI-BLAST
|
Thiamine transport system permease protein thiP
|
|
nr
(database updated :
2007.02.20
)
|
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BLAST
|
thiamin ABC transporter membrane protein [Escherichia coli K12]
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
|
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PROSITE
|
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PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
LEUCINE_ZIPPER
|
| Sequences |
Amino acid
FASTA format
|
0001 MATRRQPLIP GWLIPGVSAT TLVVAVALAA FLALWWNAPQ DDWVAVWQDS YLWHVVRFSF WQAFLSALLS
0071 VIPAIFLARA LYRRRFPGRL ALLRLCAMTL ILPVLVAVFG ILSVYGRQGW LATLCQSLGL EWTFSPYGLQ
0141 GILLAHVFFN LPMASRLLLQ ALENIPGEQR QLAAQLGMRS WHFFRFVEWP WLRRQIPPVA ALIFMLCFAS
0211 FATVLSLGGG PQATTIELAI YQALSYDYDP ARAAMLALLQ MVCCLGLVLL SQRLSKAIAP GTTLLQGWRD
0281 PDDRLHSRIC DTVLIVLALL LLLPPLLAVI VDGVNRQLPE VLAQPVLWQA LWTSLRIALA AGVLCVVLTM
0351 MLLWSSRELR ARQKMLAGQV LEMSGMLILA MPGIVLATGF FLLLNNTIGL PQSADGIVIF TNALMAIPYA
0421 LKVLENPMRD ITARYSMLCQ SLGIEGWSRL KVVELRALKR PLAQALAFAC VLSIGDFGVV ALFGNDDFRT
0491 LPFYLYQQIG SYRSQDGAVT ALILLLLCFL LFTVIEKLPG RNVKTD
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tcacgctgcc tgccggtttt gaaaaattga
-070 ccaaacccgc aaccacgttg gagttcacgc cagccgaagt ggcggcacaa cgtcaggcat ggattagcga
0001 atggcaacgc gccgtcagcc gttaattccc ggctggttaa ttccaggtgt aagcgccacc acgctggtgg
0071 tagcggttgc gctggcggcg tttctcgccc tgtggtggaa cgcgccgcag gatgactggg tggcagtctg
0141 gcaggacagc tatctgtggc atgtggtgcg cttctccttc tggcaggcgt ttctctcggc actgctctct
0211 gtcatacccg cgatattcct cgcccgcgcg ctctatcgca ggcgctttcc gggtcggctg gcgctgttgc
0281 gtctgtgtgc aatgaccttg atcctcccgg tgttggtcgc tgttttcggc attcttagcg tctatggtcg
0351 ccagggctgg ctggcaacac tctgccaatc gctcggtctg gagtggacct tttcgcccta cggcctgcaa
0421 ggtattttgc tggcccatgt gttttttaat ctgccgatgg cgagccgctt attactccag gcactggaaa
0491 acatccccgg cgaacagcgt caacttgccg cccagcttgg gatgcgtagc tggcattttt tccgcttcgt
0561 cgaatggccg tggttacggc gacaaatccc gccggttgct gcgcttatct ttatgctctg tttcgccagc
0631 ttcgccaccg tgctatcgct ggggggcggt ccgcaggcga ccactatcga gctggcaatc tatcaggcgc
0701 tgagttacga ctacgatcct gcccgcgcgg caatgctggc gctgctccag atggtgtgct gcctcgggct
0771 ggtgctgttg agtcagcgat tgagtaaggc cattgcgccc ggcaccacgc tgctgcaagg ctggcgcgac
0841 ccggacgatc gtctgcatag ccgcatttgc gacacggtgt taattgtgct ggcgctgctg ctgttgctgc
0911 caccgttact ggcggtgatc gtcgatgggg taaatcgcca gttgccggaa gtgctggcac aaccggtgct
0981 gtggcaggcg ctgtggacct cgttgcgtat tgcgctggcg gcaggtgtat tgtgcgtagt gctgaccatg
1051 atgctgctat ggagcagtcg cgaactgcgg gcgcggcaga aaatgctggc gggtcaggtg ctggagatga
1121 gcggcatgtt gatcctcgcc atgccgggga ttgtgctggc taccggcttc tttttactgc tcaacaacac
1191 tatcggcctg ccacaatctg ctgacggcat tgtgattttc accaatgcgt taatggcgat cccttatgcg
1261 ctgaaagtgc tggaaaaccc gatgcgcgat atcaccgccc gctacagcat gttatgtcag tcgctgggga
1331 ttgaaggctg gtcacgctta aaagtggtgg agctgcgcgc cctgaaacgt ccactggcgc aggcgctggc
1401 ctttgcatgc gtgctgtcga ttggtgattt tggcgtggtg gcgttgttcg gtaacgatga tttccgcacc
1471 ctgccgtttt atctctacca gcaaattggc tcctatcgca gccaggacgg tgcggtcacc gcgttaattc
1541 tgctgctgct ctgttttctg ctgtttaccg tgattgaaaa actaccgggg cgaaatgtta aaactgactg
1611 atatcacctg gctttaccac catttgccga tgcgttttag cttaacggtg gaacgcggcg agcaggtggc
1681 gatcctcggg ccaagcggcg cgggtaaaag t
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