|
General information
|
|
Deletion
|
OCR69-7
|
|
D or ND
|
D
|
|
Location (BP)
|
1,333,855 - 1,339,792
|
|
Length (BP)
|
5,938
|
|
Related strains
|
|
Strains
|
|
 |
|
System
|
SD2-D98
|
|
Plasmid Name
|
p(ribA)
|
 |
|
Primer
|
|
Deleted Region
|
5'
|
Primer
|
R69-7A-CmN
|
|
Sequence
|
5'-gAgAATcAgggcTTcgcAAcccTgTcATTAAggAggAgcT|cTggTgTcccTgTTgATAcc-3'
|
|
3'
|
Primer
|
R69-3B-CmC
|
|
Sequence
|
5'-TTTTcTgcgccgTcgTTgccggAgcAcAATggAAcATTAAcAcTTATTcAggcgTAgcAc-3'
|
|
Complemented region
|
5'
|
Primer
|
226-12
|
|
Sequence
|
5'-TgTTccgTTgcgcTgcccggATTAcAggAcggATcTgccggTTATTTTgcTTccg-3'
|
|
Position
|
1336543
|
|
3'
|
Primer
|
226-13
|
|
Sequence
|
5'-cggATAAcAATTTcAcAcAggAAAcAgcTATgAccTAcgTcTggcAATcgAAcgc-3'
|
|
Position
|
1337375
|
|
Sequences
|
Nucleotide
Fasta Format
View sequence out neighbor 100bp
|
-00100 ATTTGGGTTG TTATCAAATC GTTACGCGAT
-00070 GTTTGTGTTA TCTTTAATAT TCACCCTGAA GAGAATCAGG GCTTCGCAAC CCTGTCATTA AGGAGGAGCT
000001 ATGTCGTCAA CCCTACGAGA AGCCAGTAAG GACACGTTGC AGGCCAAAGA TAAAACTTAC CACTACTACA
000071 GCCTGCCGCT TGCTGCTAAA TCACTGGGCG ATATCACCCG TCTACCCAAG TCACTCAAAG TTTTGCTCGA
000141 AAACCTGCTG CGCTGGCAGG ATGGTAACTC GGTTACCGAA GAGGATATCC ACGCGCTGGC AGGATGGCTG
000211 AAAAATGCCC ATGCTGACCG TGAAATTGCC TACCGCCCGG CAAGGGTGCT GATGCAGGAC TTTACCGGCG
000281 TACCTGCCGT TGTTGATCTG GCGGCAATGC GCGAAGCGGT TAAACGCCTC GGCGGCGATA CTGCAAAGGT
000351 TAACCCGCTC TCACCGGTCG ACCTGGTCAT TGACCACTCG GTGACCGTCG ATCGTTTTGG TGATGATGAG
000421 GCATTTGAAG AAAACGTACG CCTGGAAATG GAGCGCAACC ACGAACGTTA TGTGTTCCTG AAATGGGGAA
000491 AGCAAGCGTT CAGTCGGTTT AGCGTCGTGC CGCCAGGCAC AGGCATTTGC CATCAGGTTA ACCTCGAATA
000561 TCTCGGCAAA GCAGTGTGGA GTGAATTGCA GGACGGTGAA TGGATTGCTT ATCCGGATAC ACTCGTTGGT
000631 ACTGACTCGC ACACCACCAT GATCAACGGC CTTGGCGTGC TGGGGTGGGG CGTTGGTGGG ATCGAAGCAG
000701 AAGCCGCAAT GTTAGGCCAG CCGGTTTCCA TGCTTATCCC GGATGTAGTG GGCTTCAAAC TTACCGGAAA
000771 ATTACGTGAA GGTATTACCG CCACAGACCT GGTTCTCACT GTTACCCAAA TGCTGCGCAA ACATGGCGTG
000841 GTGGGGAAAT TCGTCGAATT TTATGGTGAT GGTCTGGATT CACTACCGTT GGCGGATCGC GCCACCATTG
000911 CCAATATGTC GCCAGAATAT GGTGCCACCT GTGGCTTCTT CCCAATCGAT GCTGTAACCC TCGATTACAT
000981 GCGTTTAAGC GGGCGCAGCG AAGATCAGGT CGAGTTGGTC GAAAAATATG CCAAAGCGCA GGGCATGTGG
001051 CGTAACCCGG GCGATGAACC AATTTTTACC AGTACGTTAG AACTGGATAT GAATGACGTT GAAGCGAGCC
001121 TGGCAGGGCC TAAACGCCCA CAGGATCGCG TTGCACTGCC CGATGTACCA AAAGCATTTG CCGCCAGTAA
001191 CGAACTGGAA GTGAATGCCA CGCATAAAGA TCGCCAGCCG GTCGATTATG TTATGAACGG ACATCAGTAT
001261 CAGTTACCTG ATGGCGCTGT GGTCATTGCT GCGATAACCT CGTGCACCAA CACCTCTAAC CCAAGTGTGC
001331 TGATGGCCGC AGGCTTGCTG GCGAAAAAAG CCGTAACTCT GGGCCTCAAG CGGCAACCAT GGGTCAAAGC
001401 GTCGCTGGCA CCGGGTTCGA AAGTCGTTTC TGATTATCTG GCAAAAGCGA AACTGACACC GTATCTCGAC
001471 GAACTGGGGT TTAACCTTGT GGGATACGGT TGTACCACCT GTATTGGTAA CTCTGGGCCG CTGCCCGATC
001541 CTATCGAAAC GGCAATCAAA AAAAGCGATT TAACCGTCGG TGCGGTGCTG TCCGGCAACC GTAACTTTGA
001611 AGGCCGTATC CATCCGCTGG TTAAAACTAA CTGGCTGGCC TCGCCGCCGC TGGTGGTTGC CTATGCGCTG
001681 GCGGGAAATA TGAATATCAA CCTGGCTTCT GAGCCTATCG GCCATGATCG CAAAGGCGAT CCGGTTTATC
001751 TGAAAGATAT CTGGCCATCG GCACAAGAAA TTGCCCGTGC GGTAGAACAA GTCTCCACAG AAATGTTCCG
001821 CAAAGAGTAC GCAGAAGTTT TTGAAGGCAC AGCAGAGTGG AAGGGAATTA ACGTCACACG ATCCGATACC
001891 TACGGTTGGC AGGAGGACTC AACCTATATT CGCTTATCGC CTTTCTTTGA TGAAATGCAG GCAACACCAG
001961 CACCAGTGGA AGATATTCAC GGTGCGCGGA TCCTCGCAAT GCTGGGGGAT TCAGTCACCA CTGACCATAT
002031 CTCTCCGGCG GGCAGTATTA AGCCCGACAG CCCAGCGGGT CGATATCTAC AAGGTCGGGG TGTTGAGCGA
002101 AAAGACTTTA ACTCCTACGG TTCGCGGCGT GGTAACCATG AAGTGATGAT GCGCGGCACC TTCGCCAATA
002171 TTCGCATCCG TAATGAAATG GTGCCTGGCG TTGAAGGGGG GATGACGCGG CATTTACCTG ACAGCGACGT
002241 AGTCTCTATT TATGATGCTG CGATGCGCTA TAAGCAGGAG CAAACGCCGC TGGCGGTGAT TGCCGGGAAA
002311 GAGTATGGAT CAGGCTCCAG TCGTGACTGG GCGGCAAAAG GTCCGCGTCT GCTTGGTATT CGTGTGGTGA
002381 TTGCCGAATC GTTTGAACGA ATTCACCGTT CGAATTTAAT TGGCATGGGC ATCCTGCCGC TGGAATTTCC
002451 GCAAGGCGTA ACGCGTAAAA CGTTAGGGCT AACCGGGGAA GAGAAGATTG ATATTGGCGA TCTGCAAAAC
002521 CTACAACCCG GCGCGACGGT TCCGGTGACG CTTACGCGCG CGGATGGTAG CCAGGAAGTC GTACCCTGCC
002591 GTTGTCGTAT CGACACCGCG ACGGAGTTGA CCTACTACCA GAACGACGGC ATTTTGCATT ATGTCATTCG
002661 TAATATGTTG AAGTAACAAC TATTTGCTTG CCGGTTATTT TGCTTCCGGC AAGCAAATGA ATTACACAAT
002731 GCAAGAGGGT TATTTGTTCA GCAAATGGCC CATTTTCTCG GCTTTGGTAT CGAGATAATG TTCGTTATTG
002801 GGGTTACGAC CTACAATCAA TGGTACGCGT TCAACAATAT TAATCCCTGC TTCGGTCAGA ATTTCGACTT
002871 TTTTCGGGTT ATTGGTTAAC AAGCGGACTT CATTGACGCC AAGGAGTTTG AACATATCAG CGCAAAGAGT
002941 GAAGTCGCGC TCATCAGCGG CGAAGCCTAA CTGGTGGTTA GCCTCTACGG TATCGTAACC TTGATCCTGC
003011 AGTGCGTAAG CGCGGATTTT ATTCAGCAGA CCAATGTTAC GACCTTCCTG ACGGTGATAC AGCAAAATAC
003081 CACGGCCTTC CTCGGCAATT TGCGTCAATG CCGCTTCGAG CTGGAAGCCA CAATCGCAGC GCAAGCTGAA
003151 CAGGGCGTCA CCGGTCAGAC ATTCGGAATG GACGCGCGCA AGTACCGGGG TATGCCCGGA AATATCGCCA
003221 TAGACTAGCG CGACATGATC GTGTCCGGTT GCCAGTTCTT CAAATCCCAC CATCAGGAAA TCGCCCCATG
003291 GGGTTGGCAG TTTGGCTTCT GCCACACGTT TAAGCTGCAT GAAATTCTCC AGATAATGCT GGTTCTGTAT
003361 TGGCTTATTT TGCCATAACG AGAAGGGGTT CACCTAATCA CGACGCGTCG ATCGTTCACG GAATGGCACA
003431 AATCTGTCAA TTTTTCCTGG AACTGGCGTT TTCAGTTATG ATTGTGGGAC TTATCAAAAA GGAGAGGCCA
003501 TGCGTTCGAT TGCCAGACGT ACCGCAGTGG GAGCTGCACT ATTGCTTGTC ATGCCAGTAG CCGTATGGAT
003571 TTCTGGCTGG CGTTGGCAAC CTGGAGAACA AAGTTGGCTA CTAAAAGCGG CTTTTTGGGT TACTGAAACT
003641 GTCACCCAGC CCTGGGGCGT CATTACACAT TTGATTTTAT TCGGCTGGTT TCTCTGGTGT CTGCGTTTTC
003711 GCATTAAGGC TGCCTTTGTA TTATTTGCCA TTCTGGCGGC CGCAATCCTT GTGGGACAAG GCGTTAAATC
003781 CTGGATCAAA GACAAAGTCC AGGAACCACG ACCTTTTGTT ATCTGGCTGG AAAAAACACA TCATATTCCG
003851 GTTGATGAGT TCTACACTTT AAAGCGAGCA GAACGCGGAA ATCTAGTGAA AGAACAGTTG GCTGAAGAGA
003921 AAAATATCCC ACAATATTTG CGTTCACACT GGCAGAAAGA GACGGGGTTT GCCTTTCCTT CCGGTCACAC
003991 GATGTTTGCT GCCAGTTGGG CACTGCTGGC CGTTGGTTTG CTGTGGCCGC GTCGGCGAAC GTTAACCATT
004061 GCTATCTTGC TGGTCTGGGC AACGGGAGTC ATGGGAAGCC GCCTGCTGCT CGGGATGCAT TGGCCACGCG
004131 ATCTGGTAGT AGCTACGTTG ATTTCGTGGG CGCTGGTGGC GGTGGCAACG TGGCTTGCGC AACGAATTTG
004201 TGGGCCATTA ACACCACCTG CGGAAGAAAA TCGCGAAATA GCGCAACGAG AACAAGAAAG TTAACGCTGG
004271 TTGATTTTCC GAATTTAGCC CTTAAATCAT CAACAATGCG TGTGGATGCC ATTTCGCAGA CGGCGCGAAA
004341 ATGGTACTTT AAAGGGCTAT TGCGGTAAGT TGACCATAAT TTATTCGCTC TAACCACATA ACGGGAAGTA
004411 ATGTGAAATA TTTACTCATT TTCTTACTGG TGTTAGCGAT CTTCGTGATT TCGGTCACGT TGGGTGCGCA
004481 GAACGATCAA CAGGTGACGT TTAATTATCT GTTAGCGCAA GGGGAGTACC GTATTTCCAC ATTGCTGGCG
004551 GTATTGTTTG CTGCGGGGTT TGCTATCGGT TGGTTGATTT GTGGCCTGTT CTGGCTGCGA GTTCGTGTTT
004621 CCCTGGCGCG CGCTGAACGT AAAATAAAGC GACTGGAAAA CCAGCTTTCA CCCGCGACTG ACGTGGCTGT
004691 AGTGCCGCAC TCGTCAGCGG CGAAGGAATA ACTTTCTATG CTGGAGTTGT TGTTTCTGCT TTTGCCTGTA
004761 GCCGCTGCCT ATGGCTGGTA TATGGGCCGC AGAAGTGCGC AACAAAACAA GCAAGATGAA GCCAACCGCT
004831 TGTCGCGTGA TTACGTAGCG GGGGTTAACT TCCTGCTTAG TAATCAACAG GATAAAGCGG TAGACCTGTT
004901 TCTCGATATG CTTAAAGAGG ATACAGGCAC CGTTGAAGCC CACCTTACGC TCGGAAACCT GTTCCGTTCG
004971 CGTGGCGAAG TTGATCGCGC TATTCGCATC CATCAGACCC TAATGGAAAG CGCCTCGCTG ACCTATGAAC
005041 AGCGTCTGTT GGCGATTCAA CAACTGGGGC GTGATTACAT GGCCGCCGGG TTATATGACC GCGCGGAAGA
005111 CATGTTCAAT CAGCTGACCG ATGAAACTGA CTTCCGCATT GGCGCGCTGC AACAGTTGCT ACAAATCTAC
005181 CAGGCTACCA GTGAGTGGCA GAAAGCAATT GATGTTGCCG AACGCCTGGT GAAGCTGGGT AAAGATAAAC
005251 AGCGCGTCGA AATTGCCCAT TTCTACTGTG AGTTAGCCCT GCAGCATATG GCCAGCGACG ATCTCGATCG
005321 TGCCATGACC TTGCTAAAAA AAGGGGCGGC GGCAGATAAA AACAGCGCCC GCGTATCCAT AATGATGGGA
005391 CGCGTGTTTA TGGCGAAAGG AGAATACGCC AAAGCCGTCG AAAGTCTGCA ACGCGTGATA TCCCAGGACA
005461 GAGAACTGGT CAGCGAAACG CTGGAAATGT TGCAAACCTG CTATCAGCAG TTGGGTAAAA CTGCCGAATG
005531 GGCAGAATTC CTGCAGCGTG CGGTGGAAGA GAACACCGGT GCCGATGCTG AATTGATGCT TGCTGATATC
005601 ATCGAAGCGC GCGACGGTAG TGAGGCCGCA CAGGTCTATA TTACGCGCCA GCTTCAGCGT CATCCGACCA
005671 TGCGTGTGTT CCATAAGTTA ATGGATTACC ACTTAAATGA AGCGGAAGAA GGGCGTGCCA AAGAGAGCCT
005741 GATGGTGCTG CGTGACATGG TTGGCGAGAA GGTACGTAGT AAGCCTCGTT ATCGTTGCCA GAAATGTGGT
005811 TTTACCGCAT ACACCCTCTA CTGGCATTGT CCGTCTTGTC GGGCCTGGTC AACCATTAAA CCGATTCGCG
005881 GTCTTGATGG CCTGTAATTT TTAAAAAAAA TCCGACTTTA GTTACAACAT ACTAATTATT AATGTTCCAT
005951 TGTGCTCCGG CAACGACGGC GCAGAAAAAG CCTGCCAGGG GAGAAATCGC AACTGTTAAT TTTTTATTTC
006021 CACGGGTAGA ATGCTCGC
|