|
General information
|
|
Deletion
|
OCR47-15 (BK5-3 / AK4-3-29)
|
|
D or ND
|
D
|
|
Location (BP)
|
694,183 - 701,250
|
|
Length (BP)
|
7,068
|
|
Related strains
|
|
Strains
|
|
 |
|
System
|
FRT2 (BK5-3 / AK4-3-29)
|
|
Plasmid Name
|
(FRT3)
|
|
|
Primer
|
|
Deleted Region
|
5'
|
Primer
|
170-19
|
|
Sequence
|
5'-ttgctgcctttttgctcgcccgatccccatcgtggaagtcgtcgatgaccaaaaaactcc-3'
|
|
3'
|
Primer
|
171-29
|
|
Sequence
|
5'-TAAAcgccTggTgcTAcgccTgAATAAgTgAAATgTcAgcTTcgTcgAgg-3'
|
|
Sequences
|
Nucleotide
Fasta Format
View sequence out neighbor 100bp
|
-00100 ATAGCCGTGG GTGGCATCCA GCAGATCGGC
-00070 CATCTTCGAT GAATCGTACT CGTTCATCTG ACAGCCCCAG GTTTTAATAT GGAGTTTTTT GGTCATCGAC
000001 TTGCTCTTGC GAAATAGTAG CCAGGAATGC AGGGCGCATA GTGTAATGCT TTGCTGCCGT TGTGACCAGT
000071 ATGAGCGTTA TCAGCCCTTA GGGGTAAAAA TCCTGTAAAC TTAAAGCATA TTGCTAACAG GATGATTGAC
000141 CATGACAAAT CAACCAACGG AAATTGCCAT TGTCGGCGGA GGAATGGTCG GCGGCGCACT GGCGCTGGGG
000211 CTGGCACAGC ACGGATTTGC GGTAACGGTG ATCGAGCACG CAGAACCAGC GCCGTTTGTC GCTGATAGCC
000281 AACCGGACGT GCGGATCTCG GCGATCAGCG CGGCTTCGGT ATCATTGCTT AAAGGGTTAG GGGTCTGGGA
000351 TGCAGTACAG GCTATGCGTT GCCATCCTTA CCGCAGACTG GAAACGTGGG AGTGGGAAAC GGCGCATGTG
000421 GTGTTTGACG CCGCTGAACT TAAGCTACCG CTGCTTGGCT ATATGGTGGA AAACACTGTC CTGCAACAGG
000491 CGTTGTGGCA GGCGCTGGAA GCGCATCCGA AAGTAACGTT ACGTGTGCCA GGCTCGCTGA TTGCGCTGCA
000561 TCGCCATGAT GATCTTCAGG AGCTGGAGCT GAAAGGCGGT GAAGTGATTC GCGCGAAGCT GGTGATTGGT
000631 GCCGACGGCG CAAATTCGCA GGTGCGGCAG ATGGCGGGAA TTGGCGTTCA TGCATGGCAG TATGCGCAGT
000701 CGTGCATGTT GATTAGCGTC CAGTGCGAGA ACGATCCCGG CGACAGCACC TGGCAGCAAT TTACTCCGGA
000771 CGGACCGCGT GCGTTTCTGC CGTTGTTTGA TAACTGGGCA TCGCTGGTGT GGTATGACTC TCCGGCGCGT
000841 ATTCGCCAGT TGCAGAATAT GAATATGGCA CAGCTCCAGG CGGAAATCGC GAAGCATTTC CCGTCGCGTC
000911 TGGGTTACGT TACACCGCTT GCCGCTGGTG CGTTTCCGCT GACGCGTCGC CATGCGTTGC AGTACGTGCA
000981 GCCAGGGCTT GCGCTGGTGG GCGATGCCGC GCATACCATC CATCCGCTGG CGGGGCAGGG AGTGAATCTT
001051 GGTTATCGTG ATGTCGATGC CCTGATTGAT GTTCTGGTCA ACGCCCGCAG CTACGGCGAA GCGTGGGCCA
001121 GTTATCCTGT CCTCAAGCGT TACCAGATGC GGCGCATGGC GGATAACTTC ATTATGCAAA GCGGTATGGA
001191 TCTGTTTTAT GCCGGATTCA GCAATAATCT GCCACCACTG CGTTTTATGC GTAATCTCGG GTTAATGGCG
001261 GCGGAGCGTG CTGGCGTGTT GAAACGTCAG GCGCTGAAAT ATGCGTTAGG GTTGTAGCCT TACAACATTG
001331 CCGGATGCGT GCCAACCGTA GGTCGGATAA GACGCGGCAG CGTCGCATCC GACATTGAAG GATAAGACGT
001401 GTCAACATCG CATTCGACAT TGAATGAACG CAGAAAAGCA AAAAGCTCGC CGAAGCGAGC TTTTTTAATG
001471 TGGCTGGGGT ACGAGGATTC GAACCTCGGA ATGCCGGAAT CAGAATCCGG TGCCTTACCG CTTGGCGATA
001541 CCCCAACTGG GTGCACTTAC AAGGTAAGCG TCTTGAATAA ATTGGCTGGG GTACGAGGAT TCGAACCTCG
001611 GAATGCCGGA ATCAGAATCC GGTGCCTTAC CGCTTGGCGA TACCCCAACA AATTGGTTTT GAATTTGCCG
001681 AACATATTCG ATACATTCAG AATTTGGTGG CTACGACGGG ATTCGAACCT GTGACCCCAT CATTATGAGT
001751 GATGTGCTCT AACCAACTGA GCTACGTAGC CAGATTGTTT CTTCGATGGC TGGGGTACCT GGATTCGAAC
001821 CAGGGAATGC CGGTATCAAA AACCGGTGCC TTACCGCTTG GCGATACCCC AATAACCGGG CGGTGAACCG
001891 CTTACTCGAA GAAGATGGCT GGGGTACCTG GATTCGAACC AGGGAATGCC GGTATCAAAA ACCGGTGCCT
001961 TACCGCTTGG CGATACCCCA TCCGTACAAC GCTTTCTGGT GAATGGTGCG GGAGGCGAGA CTTGAACTCG
002031 CACACCTTGC GGCGCCAGAA CCTAAATCTG GTGCGTCTAC CAATTTCGCC ACTCCCGCAA AAAAAGATGG
002101 TGGCTACGAC GGGATTCGAA CCTGTGACCC CATCATTATG AGTGATGTGC TCTAACCAAC TGAGCTACGT
002171 AGCCATCTTT TTTTTCGCGA TACCTTATCG GCGTTGCGGG GCGCATTATG CGTATAGAGC CTTGCAGCGT
002241 CAACCTCTTT TTCAAGGAAA ATTGCTCGAA AGTGACTGTT TGGTTAGGTT GCGAACAGCG TGGCGCTATA
002311 TTCGTCAATT ATTGTTTACT TTGTGTTTTT TCCCACCCTA CAGCCATTCT TTTGTCATAC AGGATGAAAT
002381 TCGGAATTTA ACAATAGTGG TGGGAAATTA ATCTATGAAA TACTGGCCTA CAGTGATGAG TTGTCAAACA
002451 GTGATGTGGC AAACCCGGAA CATTTCCTTA CTGCATATCA GAATCAACAA GCACCTCAAT AACTGAAACA
002521 GCCCCGGATT TCACCGGGGC TGTTTCGCAT TTCTTACTTA TACGCCGACT GGTGAACACC AACCGCGCGA
002591 CCAGACGGAT CGTCCATTTT CTTGAACGCT TCATCCCATT CGATCGCTTT AGCGGAAGAA CAAGCGACGG
002661 AAGGACCGCC CGGCACGCAC TCAGCGGCGC TCGGAAGCGG GAATAGTTCT TCAAAGATCT CCCGATACAA
002731 GTACGCTTCT TTAGAGGTTG GCGTGTTGTA CGGGAAGCGG AAGCGGGCAG TTTCCAGTTG CTGATCAGAA
002801 ACCTGCTGCG CAGCCACTTC TTTCAGGGTG TCGATCCAAC TGTAACCGAC GCCATCGGAG AACTGCTCTT
002871 TCTGCCGCCA GGCCACGCTT GCAGGCAGAT ACGCTTCAAA ACATTCACGC AGGATGTGTT TTTCCATTTT
002941 GCCGTTACCG CACATTTTAT CCTGTGGGTT AATACGCATC GCCACATCAA GGAATTTTTT GTCGAGGAAC
003011 GGAACGCGTG CTTCCACGCC CCAGGCTGAC ATCGCTTTGT TGGCACGCGC GCAGTCATAC ATATGCAGGG
003081 CCAGCAGTTT ACGCACCGTC TCTTCATGCA GTTCTTTGGC ATTCGGTGCT TTGTGGAAGT AAAGATAACC
003151 GCCGAACACT TCATCAGAAC CTTCACCGGA CAGCACCATT TTAATGCCCA TCGCCTTGAT CTTACGCGAC
003221 ATTAAATACA TCGGTGTTGA AGCGCGAATA GTGGTCACAT CATAAGTTTC GATGTGGTAA ATCACGTCGC
003291 GGATGGCATC CAGACCTTCC TGTACAGTGA AGTGAATTTC GTGATGCACC GTGCCCAGAT GGTTTGCCAC
003361 TTCCTGGGCT GCTTTCAGAT CCGGTGAACC CGGCAGACCT ACAGCAAAGG AGTGTAACTG CGGCCACCAG
003431 GCTTCAGAGC GTTCCTGATC TTCCACGCGA CGGGCTGCGT ATTTCTTGGT GATAGCGGAA ATAATTGAGG
003501 AATCCAGACC ACCAGAAAGC AGCACACCGT AAGGCACATC AGACATCAGA TGGCTTTTAA CTGAATCTTC
003571 CAGTGCCTGA CGCAGCTCGT TTTTGTCGGT CACGTTATCT TTCACCGCAT CGTAGTCGAA CCAGTCGCGA
003641 TGATAGTAAG AACGGATTTC GCCGTCCTGG CTCCACAAAT AGCTCCCCGC CGGGAACTCT TTAATCGTGC
003711 GGCAAACTGG CACCAGCGCT TTCATTTCTG AGGCCACATA CAGCTGACCG TGTTCGTCAT ACCCCATATA
003781 CAGTGGGATG ATCCCCAGAT GGTCGCGACC AATCAGGTAG GCATCTTTTT CGCTGTCGTA CAGTGCAAAG
003851 GCAAACATGC CCTGCAAGTC GTCGAGAAAT TCCGGCCCTT TTTCCTGATA CAGCGCGAGG ATCACTTCAC
003921 AGTCAGACCC GGTCTGGAAC TGGTAACGAT CGCCATATTC GGCGCGCAAT GCCTGGTGGT TGTAGATTTC
003991 ACCGTTTACC GCCAGTACGT GGGTTTTTTG TTGGTTGTAG AGAGGTTGCG CCCCCGCGTT AACGTCAACA
004061 ATTGACAGAC GTTCGTGGGC GAGAATGGCG TTATCGCTGG CATAAATACC GGACCAGTCC GGGCCACGAT
004131 GACGCATCAG GCGTGACAGC TCGAGGGCTT TCTTACGCAG CTCAACTGCG TCTGTTTTGA TATCGAATAC
004201 GCCAAAAATT GAACACATAA CCTTCTCCGT TAACCTGGTA TTTGTTGCTT GTTGTGTTTG CTTGTTTAAA
004271 AAAATGCCGC AAAGCAGCAC TGTGCGCAAG CGATTTGGCG GTGAAAAAAT AAAAAACGTA ATGGTGATTG
004341 TCGATTGGTG AAAAAAGGTC TGGTGTGAGG ATATATTTAT TGATGAATCG ATAATTTTTA GCGGGTTTTA
004411 TTGAATGTTT ATATTTTACG GGGGCCAAAT TGCTGACAAA GTGCGATTTG TTCATGCCGG ATGCGGCGTG
004481 AACGCCTTAT CCGGCCTACA AAAGCATGAA AATTCAATAT ATTGCAGGAG CTGCGTAGGC CTGATAAGCG
004551 TAGCGCATCA GGCAGTTTGG CGTTTGTCAT CAGAGCCAAC CACGTCCGCA GACGTGGTTG CTATTCAGAT
004621 AACGTCGATT TCAGCGACTG ACGGGTAAAT CCAGCTGGGG CGGAAAGGCA TACTGTCGAT ATCGTCGAGC
004691 GACGAAACAC CAGAAAGCAC CAGAATCGTC TCCAGACCTG CCTGGAAGCC GGCCAGAATA TCGGTACGCA
004761 GGTTATCGCC GACAATCACC GTTTCTTCCG AATGCGCCTG CATTTTGTTT AATGCTGCGC GGATGATCCA
004831 CGGGCTGGGC TTACCAACAT AGAACGGTTT GCGCCCGGAG ATTTTCTCAA TCCCTGCACA CAACGCGCCA
004901 CAAGCGGGAT AAAAACCGCG CCCGTGGGTG TCCGGATTGG TGGCGATAAA ACGTGCACCG TTAGCGACGA
004971 AATAGGCTGC TTTATGCATC ATGTCCCAGT TGTAGGAACG CGTTTCGCCA ACAATCACGA AATCAGGGTT
005041 CACATCGGTA ATAGTGAAAC CGGCTTTGTA CAGTTCATGA ATCAGTGCGC CTTCGCCCAC CACATACGCT
005111 TTCTTGCCTT CCTGGCGACG CAGGAAATCG GCAGTCGCCA TCGCAGAGGT ATAAAACACG CTGTCAGGTA
005181 CATCGACACC TGCGGTGGCA AAGCGGTTCG CCAGATCTTG CCCAGTCTGC GAAGGATAGT TGGTCAGCAA
005251 CACCAGCGGC AGGCCTTTAT CCATAATCCC GTGCAAAAAT TCCGCTGCAC CCGGTACGGC GACGTTATCG
005321 TGCATCAGCA CGCCGTCGAT ATCGCAAATT ACATTTTTAA TGGTCATGGA CTACCCAGAA TATTGACAAC
005391 AATAAGCGCC ACTATAAAAG CACATTAATT TTCCAGCAAA TGCTGGAGCA AAATACCGTT GAGCATGGCG
005461 CGTTTTACCA GCGCAAAAGC GCCGATTGCC GAGCGGTGAT CCAGCTCAGA ACGTACCACC GGCAGATTAG
005531 TGCGAAACGC CTTCAGCGCC TGGGTATTAA TGCAGCTTTC AATAGCAGGG AGCAGCACTT TATCGGCTTC
005601 GGTGATTTCA CCGGCAATAA CAATTTTTTG CGGATTAAAT AAGTTGATAG CAATGGCGAT GGTTTTACCC
005671 AGATGACGAC CGACATACTC AATTACTTCC GACGCCAGAC TATCGCCTTT GTTCGCGGCT TTGCAGATAG
005741 TTTTGATGGT GCAGTCGTCC AGCGGCACGC GGCTCTGGTA GCCCTGCTTT AACAGATTCA ACACCCGTTG
005811 TTCAATGGCA GCGTTGGCAG CGATAGTTTC CAGGCAGCCA AAGTTGCCGC AGTGGCAGCG TTCACCCAGC
005881 GGTTCGACCT GAATATGGCC AATTTCACCG ACGTTGCCGT TGCGGCCAAT AAAAATGCGC CCGTTAGAGA
005951 TAATCCCGGC CCCGGTTCCG CGATGGACAC GCACCAGAAT GGAGTCTTCG CAATCCTGAC TTGCACCGAA
006021 GTAGTGCTCC GCCAGCGCCA GACTACGGAT ATCGTGACCA ACGAAACAGG TCACTTTAAA ACGTTCTTCC
006091 AGAGCTTCTA CCAGCCCCCA GTTTTCTACC TGAATATGCG GCATGTAATG AATTTTGCCG CTGTCCGGGT
006161 CAACAAGCCC TGGCAGGATC ACCGAAATCG CGATCAGCTC GCGCAGTTTG CGCTGGTAGC TATCAATAAA
006231 CTGAGCAATG GCATTCAACA GGGCATGTTC CAGCGTTTGC TGGGTACGTT CCGGCAGCGG GTAATGTTCT
006301 TCTGCCAGCA CTTTGCTGCT GAGATCAAAC AGAGTGATGG TGGCGTCATG ACGACCAAGC CGTACGCCGA
006371 TTGCGTGGAA ATTGCGGGTT TCGGTGACGA TGGAGATAGC GCGGCGGCCC CCGGTGGAGG CCTGCTGATC
006441 AACTTCTTTG ATCAGCCCGC GTTCGATAAG CTGACGCGTA ATTTTGGTTA CGCTGGCGGG GGCAAGCTGG
006511 CTTTGCTCGG CAATCTGAAT CCGCGAGATT GGCCCGTACT GGTCAATCAG GCGATAAACC GCCGCGCTGT
006581 TAAGCTGTTT TACGAGATCA ACATTACCTA TCTGAGCTTG TCCGCCTGGT GTCATACTTT CTCTTATTGA
006651 GTTACGACCT CGTTACCGTT AACGATGGTC TTGGTGATTT TAAAATCAGG TGTGAATGCA GTCAGGTTGG
006721 CTACTTTACC TGCGGCGAGT GTGCCGAGAC GTTTCTCAAC GCCAATCGCA CGCGCCGGAT AGAGCGTCGC
006791 CATACGTAGC ACTTCATCCA GTGCGATACC GCAATGTTCG ACCAGATTAC GCACGCCTTC AATCATGGTT
006861 AAGGATGAAC CGCTTAACGT ACCGTTCTCA TCCACACAAA GTCCGTTACG GTAGTATATT GTTTTACCCG
006931 CAAAAATGAA CTGTTCAATG TTGGCACCTG CTGGCGCGGT GGCGTCAGTA ACCAGACACA GTTTGTCGCC
007001 TTTCAGACGT TTAGCGTTGC GAATGTTGGC GTAATCAACA TGCAGGCCAT CAGCAATAAT ACCGCAATAA
007071 ATGTCAGCTT CGTCGAGGAT CGCGCCCGCC AGGCCAGGTT CACGACCGGT AATATACGGC ATCGCGTTGT
007141 ACAGATGGGT GGCAAAGGTA ATCCCCGC
|
