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KAO/NAIST Chromosomal Deletion Mutants - List

Genomic Deletion Single Region Deletion Genome Reduced Deletion

Genome Reanalysis Strains
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Reference
- Morimoto et al, (2008). DNA Res 15, 73-81.

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KAO/NAIST Chromosomal Deletion Mutants

Genomic Deletion

Search Condition : (Strain No = NED0100 NED0202 NED0301 NED0302 NED0400 NED0501 NED0600 NED0700 NED0802 NED0803 NED0804 NED0900 NED1002 NED1003 NED1100 NED1200 NED1300 NED1400 NED1500 NED1602 NED1802 NED1901 NED1902 NED02021 NED02022 NED2201 NED2202 NED2300 NED2402 NED2602 NED2701 NED2802 NED2900 NED3000 NED3100 NED3200 NED3301 NED3303 NED3402 NED3701 NED3800 NED4000 NED4001 NED4002 NED4100 NED37022 MGB469 MGB533 MGB559 MGB592 MGB604 MGB625 MGB723 MGB773 MGB822 MGB834 MGB860 MGB874)

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Single Region Deletion

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Strain No	Deleted Genes	Marker Gene	Deletion Length	Genome Map
NED0100	ybbU-yceK	Cm	118162	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED0202	ycxB-ydbP	Cm	103605	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED0802	yhxD-yhjP	Cm	17487	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED0803	yisB-yitD	Cm	25941	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED0804	yitH-yitZ	Cm	17484	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED0900	oppA-yjbK	Cm	16644	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED1400	gid-ylxL	Cm	31967	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED1500	spoVS-ymzA	Cm	98365	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED3402	pgcM-yvcP	Cm	21240	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED0301	ydcD-ydcK	Cm	9923	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED0302	ydcL-ydhU	Cm	104866	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED0400	ydiM-yebA	Cm	39029	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED0501	yeeK-yesX	Cm	20716	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED0600	cspB-yhcT	Cm	12272	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED1002	yjcM-yjgB	Cm	21747	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED1003	yjqB-htrA	Cm	40271	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED1100	ykuS-ykqB	Cm	30263	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED1200	slp-ylaM	Cm	18991	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED1602	yncM-fosB	Cm	13592	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED1901	yojO-yozE	Cm	27257	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED1902	cgeE-ypmQ	Cm	146269	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED2201	ypzC-drm	Cm	15283	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED2202	yqxK-yqjP	Cm	15399	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED2402	yqgZ-yqgN	Cm	10297	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED2602	yrzF-yrxA	Cm	11110	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED2802	ytzH-ytbQ	Cm	28599	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED2900	ytvB-ytoA	Cm	18536	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED4000	dltA-rocR	Cm	194897	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED3000	pckA-mntA	Cm	16428	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED3200	yunA-yurT	Cm	33550	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED3301	yurZ-yuxN	Cm	27632	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED3701	sbo-ywhH	Cm	11758	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED3800	ywcB-ywaE	Cm	22988	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED1300	ctaA-ylbE	Cm	10273	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED1802	yoxC-yocS	Cm	88038	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED2300	zwf-yqzF	Cm	28070	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED2701	ytrI-ytlI	Cm	14771	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED3100	yueJ-yukJ	Cm	19335	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED3303	smpB-yvbK	Cm	25262	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED4100	yybP-yyaJ	Cm	26579	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED02021	ycxB-sipU	Cm	50121	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED02022	yczH-ydbP	Cm	53484	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED4001	dltA-hutM	Cm	96731	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED4002	pdp-rocR	Cm	98081	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED37022	spsL-nfrA	Cm	29242	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
NED0700	yhdP-yhaL	Cm	38261	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)

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Genome Reduced Deletion

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Strain No	Deleted Genes	Deletion Start	Deletion End	Total Deletion Length	Genome Map
MGB469	(SPβ,PBSX,pro1-6,skin,pks,pps)			468354	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
MGB533	ydeK-ydhU	569556	633930	532729	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
MGB559	yisB-yitD	1147460	1173400	558670	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
MGB592	yunA-yurT	3320412	3353961	592220	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
MGB604	cgeE-yodU, ypqP-ypmQ	2145212	2291480	604083	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
MGB625	yeeK-yesX	752602	773317	624799	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
MGB723	pdp-rocR	4048077	4146157	722880	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
MGB773	ycxB-sipU	404030	454150	773001	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
MGB822	yrkS-yraK	2700983	2749579	821598	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
MGB834	sboA-ywhH	3835087	3846844	833356	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
MGB860	yybP-yyaJ	4168190	4194768	859935	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)
MGB874	yncM-yndN	1902720	1916311	873527	Reference Genome: Bacillus subtilis subsp. subtilis str. 168 (Accession No. NC_000964)

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KAO/NAIST Chromosomal Deletion Mutants - List

Genomic Deletion

Single Region Deletion

Genome Reduced Deletion