Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009643,788,2920TC45.8% 8.8 / 67.0 48intergenic (‑289/+134)atpI/uppATP synthase (subunit i)/uracil phosphoribosyltransferase
Reads supporting (aligned to +/- strand):  ref base T (8/18);  new base C (9/13);  total (17/31)
Fisher's exact test for biased strand distribution p-value = 5.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.83e-01
Rejected as consensus: E-value score below prediction cutoff.
Rejected as consensus: Frequency below/above cutoff threshold.

GGATACGGCAAAAATCAGCGGTTAACCCTTAGTAGAAGACCTTTTTTGACCGGCAAAACGGGCCTGTTCGAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGAACAATATATCCTTTTTCATTTAATTTTTCATCTAGCGCCGCAATGTAAATATCAACGTCCGAATGAT  >  NC_000964/3788043‑3788538
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                      
ggATACGGCAAAAATCAGCGGTTAACCCTTAGTAGAAGACCTTTTTTGACCGGCAAAACGGGCCTGTTCGAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGt                                                                                                                                                                                                                                                        <  2:76447/250‑1 (MQ=255)
 gATACGGCAAAAATCAGCGGTTAACCCTTAGTAGAAGACCTTTTTTGACCGGCAAAACGGGCCTGTTCGAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGttt                                                                                                                                                                                                                                                      <  2:226875/251‑1 (MQ=255)
   agccgcataaaaaaacaggctgaccgcgtcaatcgatttccggtaccggaactcgagccttgagctcAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTa                                                                                                                                                                                                                                                     >  1:195538‑M2/68‑250 (MQ=255)
           aaaaaaacaggctgaccgcgtcaatcgatttccggtaccggaactcgagccttgagctcAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTaaa                                                                                                                                                                                                                                             <  1:326596‑M2/191‑1 (MQ=255)
             aTCAGCGGTTAACCCTTAGTAGAAGACCTTTTTTGACCGGCAAAACGGGCCTGTTCGAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATTTGTCAATCTTTTTAAAGTTaaaaaa                                                                                                                                                                                                                                          <  1:70483/251‑1 (MQ=255)
                          ccTTAGTAGAAGACCTTTTTTGACCGGCAAAACGGGCCTGTTCGAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACttt                                                                                                                                                                                                                             >  1:160845/1‑251 (MQ=255)
                                 agaagaCCTTTTTTGACCGGCAAAACGGGCCTGTTCGAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGtctc                                                                                                                                                                                                                      <  1:214471/251‑1 (MQ=255)
                                            ggtaccggaactcgagccttgagctcAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGtt                                                                                                                                                                                                           <  1:48082‑M2/225‑1 (MQ=255)
                                             gtaccggaactcgagccttgagctcAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAAGACGGGTTTGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACGTTTTATCCGTTACGTCTCCACAGAATGTTc                                                                                                                                                                                                          <  2:313888‑M2/226‑1 (MQ=255)
                                                        cgagccttgagctcAAAAAATCATTCATCCGAAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCAcc                                                                                                                                                                                               >  1:245996‑M2/15‑251 (MQ=255)
                                                         aCGGGCCTGTTCGAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCt                                                                                                                                                                                              <  1:7092/251‑1 (MQ=255)
                                                            ccttgagctcAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCtat                                                                                                                                                                                            >  1:113824‑M2/11‑250 (MQ=255)
                                                              ccTGTTCGAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAAt                                                                                                                                                                                         <  1:22263/251‑1 (MQ=255)
                                                                       aaaaaTCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATAc                                                                                                                                                                                  >  2:27730/1‑249 (MQ=255)
                                                                          aaTCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGAtt                                                                                                                                                                             >  2:134221/1‑251 (MQ=255)
                                                                          aaTCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCGTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAGCTTTTTATACTTTTCGTCCCCACAGAATGTTCACATTTTCACCTAGAATTGTATACAGAtt                                                                                                                                                                             <  2:142340/251‑1 (MQ=255)
                                                                             cattcatCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCAc                                                                                                                                                                          <  1:153665/251‑1 (MQ=255)
                                                                             cattcatCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCAc                                                                                                                                                                          <  1:62011/251‑1 (MQ=255)
                                                                                  atCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAAt                                                                                                                                                                     <  2:328475/251‑1 (MQ=255)
                                                                                       cAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCa                                                                                                                                                                 >  1:156266/1‑250 (MQ=255)
                                                                                         aGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCTCCGAATAGCaaaa                                                                                                                                                              <  2:528/251‑1 (MQ=255)
                                                                                           ccTTGCAGGGATGCTGTTTCATTCGCGTAAATAAATCCTCATAATACGTGGTTGCTGAGAGGATTTACATTGAGGATGAGTACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACCTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCGATAATTGTATACAGATTCACCGAATAGCaaaaaa                                                                                                                                                            <  1:254727/251‑1 (MQ=255)
                                                                                              tGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAAc                                                                                                                                                           <  1:66576/249‑1 (MQ=255)
                                                                                                cAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTgg                                                                                                                                                        >  1:19826/1‑250 (MQ=255)
                                                                                                   ggATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATa                                                                                                                                                     >  2:50902/1‑250 (MQ=255)
                                                                                                                      taaataaaTCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCttt                                                                                                                                  <  2:283349/250‑1 (MQ=255)
                                                                                                                        aataaatCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTgg                                                                                                                               <  2:345602/251‑1 (MQ=255)
                                                                                                                             atCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGAtt                                                                                                                          >  1:193355/1‑251 (MQ=255)
                                                                                                                                       taCGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCAtttttt                                                                                                                 >  2:222359/1‑250 (MQ=255)
                                                                                                                                             tttGCTGAGAGGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGt                                                                                                          >  1:261807/1‑251 (MQ=255)
                                                                                                                                                gCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTcc                                                                                                       <  1:134221/251‑1 (MQ=255)
                                                                                                                                                      agGATTTACATTGAGGACGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACAt                                                                                                 <  2:145846/251‑1 (MQ=255)
                                                                                                                                                                       tgaggaCTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCAtctc                                                                                >  2:248392/1‑251 (MQ=255)
                                                                                                                                                                               ataATGAAAGATCGGAAAACCTGCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATATGCTTAAAGTTAAAAAACTTTTTATACTTTACGTATCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGAAAAAAACTGGATAAAAAACTGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCt                                                                        >  2:84862/1‑251 (MQ=255)
                                                                                                                                                                                  aagaaagccttGAAAACCTTCTCATCTTACACTCGGTTAGCATACCAAAGCCCCTAACATGTGTCATCCAGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGACTGTTAACATTTTCACATATACTTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGATCTgg                                                                      >  2:263612/11‑250 (MQ=255)
                                                                                                                                                                                  aTGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGa                                                                     <  1:133124/251‑1 (MQ=255)
                                                                                                                                                                                  aTGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGa                                                                     <  1:58886/251‑1 (MQ=255)
                                                                                                                                                                                        acTATGAAAACCTTCTCATAATACCCTCGTTAAGCATACAATAGACCCTAACGTGTGTCAATCTGCTTAAAGTTAAAAAACTGTTTATTCTTTACGTCTCCACAGAATGTTGACATTTTCACCTATAATTGTATCCAGATGCACGGAATAGCATAAAACTTGATAAAAAAATGAAACACCCTTTTGGGGATTTCATTTTTTATTGTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGAACAata                                                               <  2:92859/250‑1 (MQ=255)
                                                                                                                                                                                           aTGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGAACAatat                                                              <  1:50902/249‑1 (MQ=255)
                                                                                                                                                                                               aaaCCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGAACAATATATCCtt                                                        <  1:300751/251‑1 (MQ=255)
                                                                                                                                                                                                  ccTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGAACAATATATCCttttt                                                     <  1:265713/251‑1 (MQ=255)
                                                                                                                                                                                                        cATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGAACAATATATCCTTTTTCATTTa                                               <  2:21656/251‑1 (MQ=255)
                                                                                                                                                                                                             gaacagcGTTTAGCATACAATAGCCCCTAACATGTGGCAATCTGCTTAAAGTTAAAAAACTTTTTATACTTGACGGCGCCACAGAATGTTCACATTTGCAACGATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCAGTTTTGATTTTGTTCCAAACATGCGGTCAACCGCATCACCGAGACCTGGAACAATAGATCCtgtggcaggtaagttt                                          <  2:74441/245‑16 (MQ=255)
                                                                                                                                                                                                                         gCATACAAGAGCGCCTAACAAGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCTCCTATCATTATATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTATTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCCTCTCCGAGACCTGGAACAATATATCCTTTTTCATTTCATTTTTCATCTAGcgcc                              <  2:325034/251‑1 (MQ=255)
                                                                                                                                                                                                                             aCAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGAACAATATATCCTTTTTCATTTAATTTTTCATCTAGCGCCGCa                           <  1:315466/250‑1 (MQ=255)
                                                                                                                                                                                                                                     cccTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGAACAATATATCCTTTTTCATTTAATTTTTCATCTAGCGCCGCAATGTAAata                  <  2:160845/251‑1 (MQ=255)
                                                                                                                                                                                                                                                gtCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGAACAATATATCCTTTTTCATTTAATTTTTCATCt                                    <  2:165409/222‑1 (MQ=255)
                                                                                                                                                                                                                                                gtCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGAACAATATATCCTTTTTCATTTAATTTTTCATCt                                    >  1:165409/1‑222 (MQ=255)
                                                                                                                                                                                                                                                   aaTCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGAACAATATATCCTTTTTCATTTAATTTTTCATCTAGCGCCGCAATGTAAATATCAACGTCCGAatg    >  1:114135/1‑251 (MQ=255)
                                                                                                                                                                                                                                                        gTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGAACAATATATCCTTTTTCATTTAATTTTTCATCTAGCGCCGCAATGTAAATATCAACGTCCGAatgat  <  1:248392/248‑1 (MQ=255)
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                      
GGATACGGCAAAAATCAGCGGTTAACCCTTAGTAGAAGACCTTTTTTGACCGGCAAAACGGGCCTGTTCGAAAAAATCATTCATCCGCAAGCCTTGCAGGGATGCTGTTTCATTCGCTTAAATAAATCCTCATAATACGGGTTTGCTGAGAGGATTTACATTGAGGATGAGGACTATAATGAAAGCTATGAAAACCTTCTCATAATACCCTCGTTTAGCATACAATAGCCCCTAACATGTGTCAATCTGTTTAAAGTTAAAAAACTTTTTATACTTTACGTCTCCACAGAATGTTCACATTTTCACCTATAATTGTATACAGATTCACCGAATAGCAAAAAACTGGATAAAAAAATGAAACCCCCTTTTGGGGATTTCATTTTTTATTTTGTTCCAAACATGCGGTCACCCGCATCTCCGAGACCTGGAACAATATATCCTTTTTCATTTAATTTTTCATCTAGCGCCGCAATGTAAATATCAACGTCCGAATGAT  >  NC_000964/3788043‑3788538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑