Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000964	161535–164898	165474–164903	6–3940	4 [3]	[3] 6	[rrnI‑16S]–[rrnI‑23S]	[rrnI‑16S],[rrnI‑23S]

AGGTTGATAGGTCTGAGGTGGAAGTGTGGCGACACATGGAGCTGACAGATACTAATCGATCGAGGACTTAACCATATTTTTGAATGATGTCACATCTGTTATCTAGTTTTGAGAGAACACTCTCAATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATACCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAGATTTATTAATTCTACC  >  NC_000964/165461‑165724               |                                                                                                                                                                                                                                                          aGGTTGATAGGTCTGAGGTGGAAGTGTGGCGACACATGGAGCTGACAGATACTAATCGATCGAGGACTTAACCATATTTTTGAATGATGTCACATCTGTTATCTAGTTTTGAGAGAACACTCTCAATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATACCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAGAtt               <  1:303070/251‑1 (MQ=31)      gctAGGTCTGAGGTGGAAGTGTGGCGACACATGGAGCTGACAGATACTAATCGATCGAGGACTTAACCATATTTTTGAATGCTGTCACATCTGTTATCTAGTTTTGAGAGAACACTCTCAATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATACCGCACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAGATttatt           >  2:82499/3‑250 (MQ=18)          ggTCTGAGGTGGAAGTGTGGCGACACATGGAGCTGACAGATACTAATCGATCGAGGACTTAACCATATTTTTGAATGATGTCACATCTGTTATCTAGTTTTGAGGGAACACTCTCAATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATACCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAGATTTTTTAATTc      <  1:287859/251‑1 (MQ=18)               gAGGTGGAAGTGTGGCGACACATGGAGCTGACAGATACTAATCGATCGAGGACTTAACCATATTTTTGAATGATGTCACATCTGTTATCTAGTTTTGAGAGAACACTCTCAATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATACCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAGATTTATTAATTCTAc   <  1:86223/249‑1 (MQ=37)               gAGGTGGAAGTGTGGCGACACATGGAGCTGACAGATACTAATCGATCGAGGACTTAACCATATTCTTGAATGATGTCACATCTGTTATCTAGTTTTGAGAGAACACTCTCAATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATACCGAACACGGAAGTTAAGCTCTGCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAGATTTATTAATTCTAcc  <  2:84625/250‑1 (MQ=255)               gAGGTGGAAGGGTGGCGACACATGGCGCTGACAGATACTAATCGATCGAGGACTTAACCATATTTTTGAATGATGTCACATCTGTTATCTAGTTTTGAGAGAACACTCTCAATTTGTTTGGTGGCGATAGCGAAGAGGTCGCACCCGTTCCCATACCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGTTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAGATTTATTAATTCTAcc  <  2:311898/250‑1 (MQ=255)               |                                                                                                                                                                                                                                                          AGGTTGATAGGTCTGAGGTGGAAGTGTGGCGACACATGGAGCTGACAGATACTAATCGATCGAGGACTTAACCATATTTTTGAATGATGTCACATCTGTTATCTAGTTTTGAGAGAACACTCTCAATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATACCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAGATTTATTAATTCTACC  >  NC_000964/165461‑165724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑