Strain - 詳細 -
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分譲依頼
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株番号
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NIES-2565
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保存機関名
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国立環境研究所
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門名
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Heterokontophyta
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綱名
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Bolidophyceae
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目名
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科名
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学名
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Triparma laevis B.C.Booth f. inornata S.Konno, R.Ohira, C.Komuro, N.Harada, & R.W.Jordan
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シノニム
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一般名
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地名（採集年月）
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日本
太平洋, 親潮域（水深-80m）
(2008-07-20)
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採集者名
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生息環境（分離源）
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海域
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生息環境の詳細
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水深（-80m） 外洋域
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分離者名(分離年月）
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一宮睦雄
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同定者名
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一宮睦雄
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株の状態
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無菌[2021 Jun]; 単藻
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保存形態
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継代培養
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凍結保存
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不明
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培養条件（前培養条件）
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培地名:ESM
培地形状:液体
温度:5
℃
光強度:45-55
μmol phtons/m2/sec
明暗周期:10L:14D
継代培養周期:1 M
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遺伝子情報
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16S rRNA
(LN735526
)
18S rRNA
(AB546639
)
ITS-1-5.8S-ITS2
(KR998385
)
nadH1
(KR998404
)
rbcL
(AB546640
)
Whole-genome
(BLQM00000000
)
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画像
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特性
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ゲノム解読株 (Kuwata et al. 2020; Ban et al. 2023); Siliceous, Non-flagellated stage[2018 May]
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細胞サイズ(min-max)
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体制
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注意事項
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無菌; 輸送時の衝撃に弱い; 輸送時の温度変化に弱い
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文献
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Ichinomiya, M., Yoshikawa, S., Kmiya, M., Ohki, K., Takaichi, S., Kuwata, A.:
2011:
Isolation and characterization of Parmales (Heterokonta/Heterokontophyta/Stramenopiles) from the Oyashio region, Western North Pacific.:
J. Phycol.,
47,
144-151.
Strains:
2565
2682
Ichinomiya, M., Nakamachi, M., Shimizu, Y., Kuwata, A.:
2013:
Growth characteristics and vertical distribution of Triparma laevis (Parmales) during summer in the Oyashio region, western North Pacific.:
Aquat. Microb. Ecol.,
68,
107-116.
Strains:
2565
Yamada, K., Yoshikawa, S., Ichinomiya, M., Kuwata, A., Kamiya, M., Ohki, K.:
2014:
Effects of silicon-limitation on growth and morphology of Triparma laevis NIES-2565 (Parmales, Heterokontophyta).:
PLoS One,
9,
e103289 (article ID).
Strains:
2565
Ichinomiya, M., Lopes dos Santos, A., Gourvil, P., Yoshikawa, S., Kamiya, M., Ohki, K., Audic, S., De Vargas, C., Noël, M. H., Vaulot, D., Kuwata, A.:
2016:
Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms.:
ISME J.,
10,
2419-2434.
Strains:
2565
2682
3369
3370
3371
3699
3700
3701
Yamada, K., Nagasato, C., Motomura, T., Ichinomiya, M., Kuwata, A., Kamiya, M., Ohki, K., Yoshikawa, S.:
2017:
Mitotic spindle formation in Triparma laevis NIES-2565 (Parmales, Heterokontophyta).:
Protoplasma,
254,
461-471.
Strains:
2565
Tajima, N., Saitoh, K., Sato, S., Maruyama, F., Ichinomiya, M.,Yoshikawa, S., Kurokawa, K., Ohta, H., Tabata, S., Kuwata, A., Sato, N.:
2016:
Sequencing and analysis of the complete organellar genomes of Parmales, a closely related group to Bacillariophyta (diatoms).:
Curr. Genet.,
62,
887-896.
Strains:
2565
Decelle, J., Romac, S., Stern, R. F., Bendif, E., Zingone, A., Audic, S., Guiry, M. D., Guillou, L., Tessier, D., Le Gall, F., Gourvil, P., Dos Santos, A. L., Probert, I., Vaulot, D., de Vargas, C., Christen, R.:
2015:
PhytoREF: a reference database of the plastidial 16S rRNAgene of photosynthetic eukaryotes with curated taxonomy.:
Mol. Ecol. Resour.,
15,
1435-1445.
Strains:
763
764
2565
Yamada, K., Yoshikawa, S., Ohki, K., Ichinomiya, M., Kuwata, K., Motomura, T., Nagasato, C.:
2016:
Ultrastructural analysis of siliceous cell wall regeneration in the stramenopile Triparma laevis (Parmales, Bolidophyceae).:
Phycologia,
55,
602-609.
Strains:
2565
Yamada, K., Katsura, H., Noël, M.-H., Ichinomiya, M., Kuwata, A., Sato, S., Yoshikawa, S.:
2019:
Ontogenetic analysis of siliceous cell wall formation in Triparma laevis f. inornata (Parmales, Stramenopiles).:
J. Phycol.,
55,
196-203.
Strains:
2565
Kuwata, A., Yamada, K., Ichinomiya, M., Yoshikawa, S., Tragin, M., Vaulot, D., Lopes dos Santos, A.:
2018:
Bolidophyceae, a sister picoplanktonic group of diatoms – a review.:
Front. Mar. Sci.,
5,
370 (article ID).
Strains:
2565
2682
3369
3370
3371
3699
3700
3701
Kuwata, A., Saitoh, K., Nakamura, Y., Ishinomiya, M., Sato, N.:
2020:
Draft whole-genome sequence of Triparma laevis f. inornata (Parmales, Bolidophyceae), isolated from the Oyashio region, Western North Pacific Ocean.:
Microbiol. Resour. Ann..,
9,
e00367-20 (article ID).
Strains:
2565
Ban, H., Sato, S., Yoshikawa, S., Yamada, K., Nakamura, Y., Ichinomiya, M., Sato, N., Blanc-Mathieu, R., Endo, H., Kuwata, A., Ogata, H.:
2023:
Genome analysis of Parmales, the sister group of diatoms, reveals the evolutionary specialization of diatoms from phago-mixotrophs to photoautotrophs.:
Commun. Biol.,
6,
697 (article ID).
Strains:
2565
3699
3700
3701
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