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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig17378  (registered. 2003)
Contig Information
Length 844 bp
Clones 5 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 1
Wh_EM Dormant seed with water absorption 1
Wh_EMC Dormant seed with cold treatment after water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 1
Homology (BLAST) Top Hit Os01g0616400 [Oryza sativa (japonica cultivar-group)] >gi|54290411|dbj|BAD61281.1| zinc finger protein 3-like [Oryza sativa Japonica Group] >gi|113533108|dbj|BAF05491.1| Os01g0616400 [Oryza sativa (japonica cultivar-group)] >gi|215767326|dbj|BAG99554.1| unnamed protein product [Oryza sativa Japonica Group]
Score 697
Evalue 1.64167e-71
Total Hit Count 498
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig17378 
CCCCGAGCCCGTGAAAACCCTAGCGCATTCGTACGCCGGCGGCGATGTCGGGCTACCCTTTTTACCCGTACGGCCGCGGTGGCGTAGGCGACGATGCGTC
GGCGATGTCGGACTACCCTTTTCACCCATACGGCCGTGGTGGGGTAGGCGACAATGCGGCGGCGAGGTACTCTTCCTACGAGATCGACCTCATCGCGGCG
CGCTACGCTGGCGACCCGTCATCCTACCCCTACCCCTCCGCCTCCGGCGGATTCGACCCGCATGTCGGCGCGAGGCGACCCGCAGATGTTCTCTATCATC
AATCTATTATGGGAAGCCATAGTACTATTGGGCAGAGTGATGCATTTTATTCTCCGAACACTATGGTCAAACGCCCTAGGCTTGAAAGCAGCCTTCCTAT
TTATCCACAGCGACCTGGGGAAAAGGAGTGTGCTTTCTATATGAGGACCAGAACATGTAAGTACGAAGAAACCTGCAAATTTGACCATCCACAATGGGTT
CCAGAGGGCGGGATTCCAAATTGGAAAGAGGGTACAAAGGCTGGGGAATCCTATCCCGAACGTCCAGGGGAACCAAATTGTCCTTTTTTTGTAAAGACTG
GTGAGTGTAAGTTTGGGTCTAAATGCAAGTTCAACCATCCAAAGAAAAAGGATGACGGAACAGTGGCTGGACCAGGCGATAAAGAGTCTCTATTTTCTGC
TAATTCTACCTTACCGGTGAAGCCTTCTGAGCCTTGTCCGGAGTCTCTAATTTCTGGTAATTCTACCTTACCGGTGAAGCCTTCTAAACCTTGTCCGGTA
AAAGGCTATCCCCTCTCCCTCCCTCCCTCTCCCTCTCCCTCTCA
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