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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_EMI_all.Contig2197
Contig Information
Length 2234 bp
Tissue Dormant seed with water absorption after breaking
Clones 45 Clones [Download: CSV  ,  FASTA ]
whei1c06    whei2b20    whei4h07    whei4m21    whei5e10    whei5f15    whei5m04    whei5m23    whei7n19    whei8c06    whei8c22    whei10o07    whei11g17    whei12a05    whei13a07    whei13j17    whei13p19    whei14m08    whei14m16    whei15l03    whei16d11    whei16j24    whei17a08    whei17i12    whei17p05    whei18i02    whei19p21    whei20l12    rwhei1c06    rwhei2b20    rwhei4h07    rwhei4m21    rwhei5m04    rwhei5m23    rwhei7n19    rwhei8c06    rwhei8c22    rwhei11g17    rwhei12a05    rwhei13p19    rwhei14m08    rwhei14m16    rwhei16d11    rwhei19p21    rwhei20l12   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0821100 [Oryza sativa (japonica cultivar-group)] >gi|29124135|gb|AAO65876.1| heat shock protein cognate 70 [Oryza sativa (japonica cultivar-group)] >gi|108711797|gb|ABF99592.1| Heat shock cognate 70 kDa protein 2, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113550195|dbj|BAF13638.1| Os03g0821100 [Oryza sativa (japonica cultivar-group)] >gi|125588425|gb|EAZ29089.1| hypothetical protein OsJ_012572 [Oryza sativa (japonica cultivar-group)] >gi|215697587|dbj|BAG91581.1| unnamed protein product [Oryza sativa Japonica Group]
Score 2184
Evalue 0
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_EMI_all.Contig2197 
AGCTGCGCAAAGGCTCGACAAACCCTAACCCTAGTCCATAGCTAGCTTAGCTTCCTTCCTCTCGATCTAGCTAGAGCCATGGCGCCGACCAAGGGCGAGG
GGCCGGCCATCGGCATCGACCTCGGCACCACCTACTCGTGCGTCGGCGTGTGGCAGCACGACCGCGTCGAGATCATCGCCAACGACCAGGGCAACCGCAC
CACGCCCTCGTACGTCGCCTTCACCGACTCGGAGCGCCTCATCGGCGATGCCGCCAAGAACCAGGTCGCCATGAACCCCATCAACACCGTCTTCGATGCG
AAGCGTCTTATTGGCAGAAGGTTTGCTGATGCCCCTGTCCAGAGTGATATTAAGATGTGGCCGTACAAGGTTATTCCTGGCCCCGCAGACAAGCCTATGA
TTGTAGTGCAGTACAAGGGTGAGGACAAGCAGTTCTCAGCTGAAGAAATTTCTTCCATGGTCCTCATCAAGATGCGTGAGATCGCTGAGGCTTACCTAGG
AGTAACTATTAAGAATGCTGTTGTCACCGTGCCTGCTTACTTCAATGATTCCCAGAGGCAGGCAACCAAGGATGCCGGTGTTATTGCTGGTCTTAATGTG
ATGCGTATCATCAACGAGCCCAACAGCAGCTGCAATTGCTTATGGTCTTGACAAGAAGGCTACCAGTGTCGGTGAGAAGAATGTGCTTATCTTTGACCTC
GGTGGTGGCACTTTTGATGTCTCTCTCCTTACCATTGAGGAGGGTATTTTTGAGGTCAAGGCCACAGCTGGTGACACTCACCTTGGTGGGGAGGACTTTG
ACAACCGTATGGTGAACCACTTTGTCCAAGAGTTCAAGAGGAAGCACAAGAAGGATATCAGTGGAAACCCCAGGTCTTTGAGGAGGCTCAGGACTTCATG
TGAGAGGGCGAAGAGGACCCTTTCTTCCACTGCCCAAACCACCATCGAGATTGATTCACTCTTCGAGGGAGTTGATTTCTATTCCACCATCACCAGGGCC
AGGTTTGAGGAGCTCAACATGGACCTCTTCAGGAAGTGCATGGAGCCAGTGGAGAAGTGCCTGAGGGATGCCAAGATGGACAAGAGCACCATCCATGATG
TCGTGCTTGTTGGTGGTTCCACCAGAATCCCCAGAGTTCAGCAGCTGTTGCAGGACTTCTTCAACGGGAAGGAGCTCTGCAAGAGCATCAACCCTGATGA
AGCCGTTGCCTACGGTGCTGCCGTCCAGGCTGCAATCCTCAGTGGTGAGGGGAACGAGAAGGTGCAGGACCTTCTCCTCCTTGATGTCACCCCACTGTCT
CTTGGTCTTGAGACTGCTGGAGGAGTCATGACTGTGCTCATCACCCGGAACACCACCATCCCCACCAAGAAGGAGCAGGTCTTCTCCACCTACTCCGACA
ACCAGCCTGGTGTGCTCATCCAGGTTTTTGAGGGTGAGAGGACAAGGACCAGGGACAACAACCTGCTTGGCAAGTTTGAGCTCTCCGGCATCCCGCCTGC
ACCCAGGGGTGTTCCCCAGATCACTGTCTGCTTCGACATTGATGCCAACGGTATCCTGAATGTCTCTGCCGAGGACAAGACCACTGGCCAGAAGAACAAG
ATCACTATCACCAACGACAAGGGCAGGCTGAGCAAGGACGACATTGAGAAGATGGTCCAGGATGCAGAGAAGTACAAGTCTGAGGATGAGGAGCACAAGA
AGAAGGTTGATGCCAAGAACTCCCTGGAGAACTACGCCTACAACATGAGGAACACCATCCAGGACGAGAAGATTGCCTCCAAGCTGCCTGCTGACGACAA
GAAGAAGATTGAGGATGCTGTCGACGCCGCGATCCAGTGGCTTGACGCCAACCAGCTTGGTGAGGTTGACGAGTTTGAGGACAAGATGAAGGAGCTGGAG
GGCCTCTGCAACCCCATCATCGCCAAGATGTACCAGGGTGCCGGTGCTGACATGCCCGGAGGCATGGACGAGGACGCGCCGGCTGCCAGCGGCGGTGCTG
GCCCCAAGATCGAGGAGGTCGACTAAGTTATTCTCTTTGATATAGTGAGAAAATACACTATACGCCATTTGTTTCAGTCCTGGGTGCCAATCATATCACC
TGGGCTGGAAGTTTTGTTGTACTTTTGGTCTGTAGCATCACGAGACTTGTGTGTACCGTAAACAATGCAATGATGCATGTTTTGGCTCATTGTTGATTTC
ANCTTAATGCTTATTGTTTGGACTAAAAAAAAAA
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