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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_KMV_all.Contig1346
Contig Information
Length 782 bp
Tissue Shoot grown with continuous light after cold treatment
Clones 2 Clones [Download: CSV  ,  FASTA ]
whkv10f11    rwhkv10f11   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os04g0668900 [Oryza sativa (japonica cultivar-group)] >gi|21105122|gb|AAC35554.3| oxidase [Oryza sativa (japonica cultivar-group)] >gi|32488386|emb|CAE02811.1| OSJNBa0043A12.16 [Oryza sativa (japonica cultivar-group)] >gi|113565770|dbj|BAF16113.1| Os04g0668900 [Oryza sativa (japonica cultivar-group)] >gi|215695465|dbj|BAG90652.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218195789|gb|EEC78216.1| hypothetical protein OsI_17850 [Oryza sativa Indica Group]
Score 663
Evalue 1.25822e-67
Total Hit Count 224
Registered year 2003
Contig Sequence     [ Download ]
>Wh_KMV_all.Contig1346 
ATTGGGTGGCAACTCTGTATGGATTGATCGCTTTCTTGCGCGGTTTAGTGCCTTCTTTTACTACTTTGTCACTGTTGCCATGTACATGCTGAGCCCAAGA
ATGGCATACCACTTTTCTGAATGTGTTGAGAGGCATGCATACTCAACTTATGACAAGTTCCTAAAGCTCAATGGAGAGGAGTTGAAAAAACTACCAGCTC
CAGAGGTGGCTGTAAACTATTACATGAATGAGGATCTCTACATGTTTGATGAGTTTCAAACATCAAGAGCTCCAAATTCTAGGAGGCCTAAAGTTGATAA
CTTGTATGATGTATTCGTGAATGTACGGGACGATGAGGCGGAGCATTGCAAGACAATGAAGGCCTGTCAAACACATGAAACCCTCCGTTCTCCTCATGCC
GTGCAGAGCTCAGTAGAAGCTGATGCAGAATGATTCTGTCAAGAAGTGCCTTGGAAATGAAGATTGACCGGTTGTACGTAACTCCGTGCTAGAGCATCAT
AGAGTATCATACTAAATTTTGGTGATATATTGTATTCCATCCTTTTTCTCCCTTCTCTTCGTATGTAGACATTAGCCAGACTTTCGTACTTGTGAATCTT
ACATAGAGAATATAGGTTTATAAATGCATCACAGATTTACAACGAGAGATGTGCACCGTTGGTCAGGCATTACCACGGGCCATGAACGGTGTAATCCAGC
TGTGTTGTGGTGTGTGTAACATCAAGTGTTTTGATGCTTGTTGAAGGAAAAGTCTTGATGTTTTGCTGATTCAAAAAAAAAA
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