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INSD information
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definition
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Oryza nivara chloroplast DNA, complete genome.
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genus Species
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Oryza nivara
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Feature Key
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SOURCE
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/mol_type
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DNA
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/gene
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rps12, psbA, matK, rps16, psbK, psbI, psbD, psbC, psbZ, psbM, petN, rpoB, rpoC1, rpoC2, rps2, atpI, atpH, atpF, atpA, rps14, psaB, psaA, ycf3, rps4, ndhJ, ndhK, ndhC, atpE, atpB, rbcL, psaI, ycf4, ycf10, petA, psbJ, psbL, psbF, psbE, petL, petG, psaJ, rpl33, rps18, rpl20, clpP, psbB, psbT, psbN, psbH, petB, petD, rpoA, rps11, rpl36, infA, rps8, rpl14, rpl16, rps3, rpl22, rps19, rpl2, rpl23, ndhB, rps7, rps15, ndhH, ndhF, rpl32, ccsA, ndhD, psaC, ndhE, ndhG, ndhI, ndhA
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/product
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ribosomal protein S12, PSII 32kDa protein, ribosomal protein S16, PSII K protein, PSII I protein, PSII D2 protein, PSII 43kDa protein, photosystem II reaction center protein Z, PSII low MW protein, cytochrome b6/f complex subunit VIII, RNA polymerase beta subunit, RNA polymerase beta' subunit-1, RNA polymerase beta' subunit-2, ribosomal protein S2, ATPase a subunit, ATPase III subunit, ATPase I subunit, ATPase alpha subunit, ribosomal protein S14, PSI P700 apoprotein A2, PSI P700 apoprotein A1, photosystem I assembly protein Ycf3, ribosomal protein S4, NADH dehydrogenase subunit J, NADH dehydrogenase subunit K, NADH dehydrogenase subunit 3, ATP synthase CF1 epsilon chain, ATPase beta subunit, ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, photosystem I subunit VIII, photosystem I assembly protein Ycf4, envelope membrane protein, cytochrome f, photosystem II protein J, PSII L protein, PSII cytochrome b559, cytochrome b6/f complex subunit VI, cytochrome b6/f complex subunit V, photosystem I subunit IX, ribosomal protein L33, ribosomal protein S18, ribosomal protein L20, ATP-dependent Clp protease proteolytic subunit, photosystem II 47 kDa protein, photosystem II protein T, photosystem II protein N, photosystem II phosphoprotein, cytochrome b6, cytochrome b6/f complex subunit IV, RNA polymerase alpha chain, ribosomal protein S11, ribosomal protein L36, translation initiation factor 1, ribosomal protein S8, ribosomal protein L14, ribosomal protein L16, ribosomal protein S3, ribosomal protein L22, ribosomal protein S19, ribosomal protein L2, ribosomal protein L23, NADH dehydrogenase subunit 2, ribosomal protein S7, ribosomal protein S15, NADH dehydrogenase subunit 7, NADH dehydrogenase subunit 5, ribosomal protein L32, heme attachment protein, NADH dehydrogenase subunit 4, photosystem I subunit VII, NADH dehydrogenase subunit 4L, NADH dehydrogenase subunit 6, NADH dehydrogenase subunit I, NADH dehydrogenase subunit 1
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/note
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unnamed protein product; orf77, unnamed protein product; orf89, unnamed protein product; orf70, unnamed protein product; orf133, unnamed protein product; orf73, GTG as initiation codon, unnamed protein product; orf132, unnamed protein product; orf82, Protein sequence is in conflict with the conceptual translation; RNA editing at #1; initiation codon is created by RNA editing, unnamed protein product; orf137, unnamed protein product; orf46, unnamed protein product; orf34, unnamed protein product; orf28, unnamed protein product; orf64, unnamed protein product; orf222, unnamed protein product; orf85, unnamed protein product; orf72, unnamed protein product; orf109, unnamed protein product; orf23, unnamed protein product; orf39, unnamed protein product; orf63, unnamed protein product; orf48, Protein sequence is in conflict with the conceptual translation; initiation codon is created by RNA editing
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/organelle
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plastid:chloroplast
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/strain
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SL10
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